Crystallographic Information Framework

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Index

Macromolecular dictionary (mmCIF) version 2.0.09

Category ENTITY_SRC_GEN

Name:
'entity_src_gen'

Description:

   Data items in the ENTITY_SRC_GEN category record details of
   the source from which the entity was obtained in cases
   where the source was genetically manipulated.  The
   following are treated separately:  items pertaining to the tissue
   from which the gene was obtained, items pertaining to the host
   organism for gene expression and items pertaining to the actual
   producing organism (plasmid).

Example:

Example 1 - based on PDB entry 5HVP and laboratory records for the structure corresponding to PDB entry 5HVP. 
 
    loop_
    _entity_src_gen.entity_id
    _entity_src_gen.gene_src_common_name
    _entity_src_gen.gene_src_genus
    _entity_src_gen.gene_src_species
    _entity_src_gen.gene_src_strain
    _entity_src_gen.host_org_common_name
    _entity_src_gen.host_org_genus
    _entity_src_gen.host_org_species
    _entity_src_gen.plasmid_name
     1  'HIV-1'  ?  ?  'NY-5'
        'bacteria'  'Escherichia'  'coli'  'pB322'


Category groups:
    inclusive_group
    entity_group
Category key:
    _entity_src_gen.entity_id

Mandatory category: no


International Tables for Crystallography

Volume G: Definition and exchange of crystallographic data

First online edition (2006)

Edited by S. R. Hall and B. McMahon

An essential guide and reference to CIF for programmers, data managers handling crystal-structure information and practising crystallographers.