BSSB: BLAST Server

Entered: Mon Feb 13 2012

Operating systems: Linux; MacOS; Solaris; MS Windows

Type:

Languages: JavaScript

Distribution: Free

Application fields: Biology; Structure

Bibliography: Uthayakumar, M., Sowmiya, G., Sabarinathan, R., Udayaprakash, N., Kirti Vaishnavi, M. & Sekar, K. (2011). J. Appl. Cryst. 44, 651-654.

Description: Basic Local Alignment Search Tool (BLAST) is one of the most widely used sequence alignment programs, but none of the existing tools for processing BLAST output provide three-dimensional structure visualization. This shortcoming has been addressed in the proposed tool BLAST Server for Structural Biologists (BSSB), which maps a BLAST output onto the three-dimensional structure of the subject protein.

References: http://bioserver1.physics.iisc.ernet.in/bssb/

 



Last updated: 13 Feb 2012