#
#  Makefile file for cif2xml 0.1.0
#  Version of 18 November 2000
#   revised 3 September 2006 to integrate with CIFtbx 3.0.4
#  H. J. Bernstein, Bernstein+Sons
#  yaya@bernstein-plus-sons.com
#
#
#
#  provide here a path to mkdecompln and rmdecompln
#
MKDECOMPLN	= ../mkdecompln
RMDECOMPLN	= ../rmdecompln
#
#  define the directory for temporary uncompressed files
#
EXPAND		= /var/tmp
#
#  The definition of VPATH must be the httpd virtual path to
#  the directory holding this version of the directory, i.e.
#  containing the ciftbx_n.n.n directory  MANIFEST.html
#  and README.cif2xml.html must be rebuilt if VPATH changes.
VPATH          =       NDB/mmcif/software
#VPATH          =       ~yaya/software
#VPATH           =       pb/pdb2cif
#
#  The definition of DECOMP must be the httpd virtual path to
#  the cgi-bin script decomp.cgi.  If this script is not available
#  define DECOMP as NODECOMP
DECOMP         =       /cgi-bin/yaya/decomp.cgi
#DECOMP         =       /~yaya/cgi-bin/decomp.cgi
#DECOMP          =       /pb/pdb2cif/cgi-bin/decomp.cgi
#DECOMP	=	NODECOMP
#
#
#
ZPATH           =       $(DECOMP)/$(VPATH)
#
#  provide here a path to cif_mm.dic
#
MMDICPATH		= 	../dictionaries/cif_mm.dic
#
#  provide here the path to the CIFtbx2 directory
TBXPATH		=	../ciftbx.src
#
#  provide a path to the shell sh here
SHELL		=	/bin/sh
#
#  Add any necessary compilation flags on the next line
FFLAGS		= -g
#
all:	postshar cif2xml
#
#  If any of the following fail, it means the basic ciftbx
#  installation needs to be redone

$(TBXPATH)/ciftbx.o:	$(TBXPATH)/ciftbx.f \
		$(TBXPATH)/ciftbx.sys \
		$(TBXPATH)/ciftbx.cmv
		( cd $(TBXPATH) ; make ciftbx.o )

$(TBXPATH)/hash_funcs.o:	$(TBXPATH)/hash_funcs.f
		( cd $(TBXPATH); make hash_funcs.o )

MANIFEST.html:	MANIFEST.html.m4 Makefile
		-@rm MANIFEST.html.BAK
		-@mv MANIFEST.html MANIFEST.html.BAK
		m4 -DZPATH=$(ZPATH) -DDECOMP=$(DECOMP) < MANIFEST.html.m4 \
		> MANIFEST.html

README.cif2xml.html:	 README.cif2xml.html.m4 Makefile
		-@rm README.cif2xml.html.BAK
		-@mv README.cif2xml.html README.cif2xml.html.BAK
		m4 -DGRAPHICS=1 \
		-DZPATH=$(ZPATH) -DDECOMP=$(DECOMP) < README.cif2xml.html.m4 \
		> README.cif2xml.html

cif2xml:	cif2xml.o $(TBXPATH)/hash_funcs.o $(TBXPATH)/ciftbx.o
		$(FC) $(FFLAGS) cif2xml.o \
		$(TBXPATH)/ciftbx.o $(TBXPATH)/hash_funcs.o \
		-o cif2xml

ciftbx.sys:	$(TBXPATH)/ciftbx.sys
		ln -f -s $(TBXPATH)/ciftbx.sys ciftbx.sys

ciftbx.cmn:	$(TBXPATH)/ciftbx.cmn
		ln -f -s $(TBXPATH)/ciftbx.cmn ciftbx.cmn

ciftbx.cmf:	$(TBXPATH)/ciftbx.cmf
		ln -f -s $(TBXPATH)/ciftbx.cmf ciftbx.cmf

ciftbx.cmv:	$(TBXPATH)/ciftbx.cmv
		ln -f -s $(TBXPATH)/ciftbx.cmv ciftbx.cmv

cif2xml.o:	cif2xml.f cif2xml.cmn ciftbx.sys ciftbx.cmn ciftbx.cmf \
		ciftbx.cmv
		$(FC) $(FFLAGS) -c cif2xml.f


clean:		
		-@rm -f *.o
		-@rm -f cif2xml
		-@rm -f *.lst
		-@rm -f *.new
		-@rm -f *.diff
		-@rm -f *.BAK
		-@rm -f *.bak
		-@$(RMDECOMPLN) *.uZ

distclean:	clean unpostshar
		./.undosymlinks

unpostshar:	postshar
		uncompress 4ins.cif.Z
		uncompress 4ins.out.Z
		-@rm -f postshar
		touch unpostshar

shars:		postshar MANIFEST Makefile README.cif2xml cif_cml.dic\
		cif2xml.cmn cif2xml.f 4ins.cif 4ins.out 4ins.prt \
		xtalt2.cif xtalt2.out xttne9.out xte29.out postshar 
		-@rm -f ../Part*
		-@rm -f ../cif2xml.cshar
		-@rm -f ../cif2xml.shar
		-@rm -f ../cif2xml.cshar.Z
		-@rm -f ../cif2xml.shar.Z
		( cd .. ; makekit -c -icif2xml.src/MANIFEST \
		 -ocif2xml.src/MANIFEST -h2 -p -s 1000k )
		mv ../Part01 ../cif2xml.cshar
		( cd .. ; makekit -icif2xml.src/MANIFEST \
		 -ocif2xml.src/MANIFEST -h2 -p -s 1000k )
		mv ../Part01 ../cif2xml.shar
		-@rm -f MANIFEST.BAK
		compress ../cif2xml.cshar
		compress ../cif2xml.shar


tests:		postshar cif_mm.dic cif_cml.dic\
		xtalt2.cif 4ins.cif 4ins.out 4ins.prt cif2xml
		-@rm -f *.lst
		-@rm -f *.new
		-@rm -f *.diff
		./cif2xml -t y -s referto cml.dtd \
			-d cif_mm.dic -d cif_cml.dic< xtalt2.cif > xtalt2.new \
			2> xtalt2.lst
		./cif2xml -e 9 -s referto cml.dtd < xtalt2.cif > xttne9.new \
			2> xttne9.lst
		./cif2xml -t y -e 29 < xtalt2.cif > xte29.new \
			2> xte29.lst
		./cif2xml -d cif_mm.dic -d cif_cml.dic -s referto cml.dtd \
			-p .._ < 4ins.cif > 4ins.new \
			2> 4ins.lst
		-@diff xtalt2.out xtalt2.new > xtalt2.diff
		-@diff xttne9.out xttne9.new > xttne9.diff
		-@diff xte29.out xte29.new > xte29.diff
		-@diff 4ins.out 4ins.new > 4ins.diff
		-@diff 4ins.prt 4ins.lst > 4insprt.diff
		cat *.diff			

cif_mm.dic:	$(MMDICPATH).Z
		ln -f -s $(MMDICPATH).Z cif_mm.dic.Z
		$(MKDECOMPLN) cif_mm.dic $(EXPAND)

4ins.cif:	4ins.cif.Z
		$(MKDECOMPLN) 4ins.cif $(EXPAND)

4ins.out:	4ins.out.Z
		$(MKDECOMPLN) 4ins.out $(EXPAND)

postshar:	
		compress 4ins.cif
		compress 4ins.out
		./.symlinks
		touch postshar
		-@rm unpostshar