|
OpenMMS V1.5.1 Std |
||||||||||
PREV PACKAGE NEXT PACKAGE | FRAMES NO FRAMES |
See:
Description
Interface Summary | |
ModuleTypes | Contains definitions for the module types used in Entry Implementations and the Foundries. |
Class Summary | |
AllRootTrans | Generate Cif metamodel Hierarchary for the entire mmCIF dictionary |
CategoryTrans | Class to represent "Categories" in Cif metamodel |
CatWriter | Metamodel visitor that generates the Java code for the category loaders which process the parsed string data in an mmCIF file and place it into a structure specific for that mmCIF category. |
CompactRootTrans | Generate a DB developement Cif to Idl Translation Hierarchary |
ConstantTrans | Class for representing IDL constants |
DevRootTrans | Generate Standard (OMG/LSR-1.0) Cif to Idl Translation Hierarchary |
DirectiveTrans | Class for creating IDL directives, e.g. |
EntryWriter | This class writes all the Java code that implements the Entry and "Sub" Entry methods. |
ExceptionFieldTrans | Class for field values for Exceptions in Cif metamodel |
ExceptionTrans | Class to represent "Exceptions" in Cif metamodel |
FieldTrans | Class for "Fields" in Cif Metamodel |
FileTrans | Class representing "Files" in Cif metamodel. |
GenAccessMethods | Generates the "list" accessor methods for a Corba interface. |
GenCifParents | Traverses the metamodel and fills in the parent node links. |
GenConstants | Generates and IDL Constants required in the metamodel |
GenDictionary | Generate a list of the Dictionary Categories and Items that are required by the field definitions specified. |
GetListMethodTrans | Class for used for representing the "get-method" on list of mmCIF structures |
IdlWriter | Traverse metamodel instance and generate CORBA IDL specification |
InitSqlWriter | Visitor class to traverse the metamodel and generate the code to initialize the RDB tables. |
InsertWriter | Visitor subclass that writes the java JDBC code for inserting data into the relational database (dbinsert). |
InterfaceTrans | Class to represent "Interfaces" in Cif metamodel |
LinkWriter | Create a table that contains all the bindings between a category name and the category data loader |
ListTrans | Class for representing "Lists" i.e. sequences of mmCIF structures |
LsrRootTrans | Generate Standard (OMG LSR/1.0) Cif to Idl Translation Hierarchary |
MatrixTrans | Class for Matrices in Cif metamodel |
MethodTrans | Class for "Methods" in Cif to Idl Translation |
MMSExpr | Generate Macromolecular Structure Expressions
The following command line options are recognized my MMSExpr:
debug=debug_level
Set error and status reporting message level debug <= 0 no messages debug == 1 basic status messages debug >= 5 trace Corba If present on the command line, Corba IDL definitions are generated. |
ModelDtdWriter | TransVisitor subclass for writing XML DTD |
ModuleTrans | Class for "Modules" in Cif to Idl Translation |
RootTrans | Class for the "Root" of the mmCIF translation metamodel |
SelectWriter | Visitor subclass that writes the java JDBC code for reading data from a relational database into the Entry Data Structures. |
SequenceTrans | Class for representing sequences (arrays) in the metamodel |
SqlWriter | Common Base class for metamodel Visitors that generate SQL code |
StdRootTrans | Generate a DB developement Cif to Idl Translation Hierarchary |
StringStruct | StringStruct can be used to create a tree of string buffers where new text can be dynamicly added to any buffer in the the tree. |
StructureTrans | Class for representing "Structures" in Cif metamodel |
SubfieldTrans | Class for representing "Sub-Fields" of a Struct-type field |
TableWriter | Visitor class for generate SQL code that creates relation DB tables |
TestRootTrans | Generate a small "toy" Cif metamodel Translation Hierarchary for development and testing purposes. |
Trans | Base class for Cif metamodel Translation elements |
TransVisitor | Base class TransVisitor or "Transformation Visitor". |
TypeDefTrans | Class for creating IDL typedefs |
ValuetypeTrans | Class for "Valuetypes" in Cif metamodel |
VectorTrans | Class for Vectors in Cif to Idl Translation |
VImplWriter | Generates the initialization code for IDL generated valuetypes |
Exception Summary | |
TransGenException | Signals an error in the metamodel translation |
Provides classes and interfaces that create and manipulate a macromolecular structure metamodel based on the mmCIF dictionary.
|
OpenMMS V1.5.1 Std |
||||||||||
PREV PACKAGE NEXT PACKAGE | FRAMES NO FRAMES |