United Kingdom
Icknield Model Building Workshop
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In Harwell
This is a comprehensive course for EM model building covering advanced use of ARP/wARP Buccaneer, CCP-EM, Coot, FlexEM, ISOLDE, LocScale, MolProbity, Refmac. The course is designed such that applicants bring their own 'live' high resolution datasets to work on with the developers during the workshop.
Tutors and topics include:
Tristan Croll (Cambridge)
ISOLDE: Interactive model building/real-space refinement based on interactive Molecular Dynamics
Grzegorz Chojnowski (Lamzin group, EMBL)
ARP/wARP: Automated model building of protein structures
Kevin Cowtan (York)
Buccaneer: Automated model building
Paul Emsley (MRC-LMB Cambridge)
Judit Debreczeni (AstraZeneca)
Coot: Macromolecular model building, model completion and validation
Arjen Jakobi (TU Delft)
LocScale: reference-based density scaling for local sharpening of cryo-EM maps
Jane Richardson (Duke)
MolProbity: All-atom structure validation
Garib Murshudov (MRC-LMB Cambridge)
Rangana Warshamanage (MRC-LMB)
Refmac: Refinement of high-resolution EM structures
Osman Salih (EBI)
EMBD: Deposition in EMBD
Agnel Joseph (CCP-EM, STFC) & Sony Malhotra (Topf Group, Birkbeck)
FlexEM: Fitting and refinement of atomic structures guided by cryoEM density
Tutors and topics include:
Tristan Croll (Cambridge)
ISOLDE: Interactive model building/real-space refinement based on interactive Molecular Dynamics
Grzegorz Chojnowski (Lamzin group, EMBL)
ARP/wARP: Automated model building of protein structures
Kevin Cowtan (York)
Buccaneer: Automated model building
Paul Emsley (MRC-LMB Cambridge)
Judit Debreczeni (AstraZeneca)
Coot: Macromolecular model building, model completion and validation
Arjen Jakobi (TU Delft)
LocScale: reference-based density scaling for local sharpening of cryo-EM maps
Jane Richardson (Duke)
MolProbity: All-atom structure validation
Garib Murshudov (MRC-LMB Cambridge)
Rangana Warshamanage (MRC-LMB)
Refmac: Refinement of high-resolution EM structures
Osman Salih (EBI)
EMBD: Deposition in EMBD
Agnel Joseph (CCP-EM, STFC) & Sony Malhotra (Topf Group, Birkbeck)
FlexEM: Fitting and refinement of atomic structures guided by cryoEM density
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