Package org.rcsb.openmms.cifparse

Provides classes to parse mmCIF files.

See:
Description

Interface Summary

Builder	The "Builder" interface used by the mmCIF parser.
CatLoader	Base interface for all category loaders.

Class Summary

CifDictionary	Structure to hold information read from a cif dictionary
CifParser	Central core of the mmCIF parser.
CifTokenizer	Class that reads the cif/STAR formatted file and breaks it up into tokens at "word" boundaries.
DataItem	Stores the information about a single cif Data Item defined in a dictionary.
DataItemList	Stores and manages the list of Data Items defined in a cif dictionary.
DictionaryCategory	Stores and manages information about a single cif category type.
DictionaryCategoryList	Stores the list of categories found when parsing a cif dictionary.
DictionaryItem	Stores and manages information about a single cif Item type.
DictionaryItemList	Stores the list of items found when parsing a cif dictionary.
LoaderLink	This class is used to bind the Cif Category/Item to the Loader class which handles data for that item

Exception Summary

CifParseException

Denotes an error condition encountered when reading a cif file.

Package org.rcsb.openmms.cifparse Description

Provides classes to parse mmCIF files. The parser makes uses the "Builder" design pattern to avoid creating its own data structure in addition to the one created by the application.