Uses of Class
org.omg.DsLSRMacromolecularStructure.DataAccessException

Packages that use DataAccessException

org.omg.DsLSRMacromolecularStructure
org.omg.DsLSRMmsReference
org.omg.DsLSRXRayCrystallography
org.rcsb.openmms.apps.dbserv
org.rcsb.openmms.apps.rdb	Provides classes that implement PDBase, an application which loads macromolecular structure data files into a relational database.
org.rcsb.openmms.apps.refserv	Classes that implement the MMS Corba Reference Server.
org.rcsb.openmms.apps.text	Classes for testing an MMS Corba server.
org.rcsb.openmms.dbinsert	Provides classes for generating the low-level JDBC calls necessary to insert the MMS Entry data structure fields into a relational database.
org.rcsb.openmms.entry	A collection of classes that provide concrete implementations of Entry objects in the Corba modules and submodules and manage the Entry level MMS cache.
org.rcsb.openmms.loader	Provides classes to load macromolecular structure data files stored in mmCIF format into the MMS Entry data structure.

Uses of DataAccessException in org.omg.DsLSRMacromolecularStructure

Fields in org.omg.DsLSRMacromolecularStructure declared as DataAccessException

DataAccessException

DataAccessExceptionHolder.value

Methods in org.omg.DsLSRMacromolecularStructure that return DataAccessException

static DataAccessException	DataAccessExceptionHelper.extract(org.omg.CORBA.Any a)
static DataAccessException	DataAccessExceptionHelper.read(org.omg.CORBA.portable.InputStream istream)

Methods in org.omg.DsLSRMacromolecularStructure with parameters of type DataAccessException

static void	DataAccessExceptionHelper.insert(org.omg.CORBA.Any a, DataAccessException that)
static void	DataAccessExceptionHelper.write(org.omg.CORBA.portable.OutputStream ostream, DataAccessException value)

Methods in org.omg.DsLSRMacromolecularStructure that throw DataAccessException

byte[]	_EntryStub.get_presence_flags()
org.omg.CosPropertyService.Property[]	_EntryStub.get_subentry_list()
int	_EntryStub.atom_site_list_size()
AtomSite[]	_EntryStub.get_atom_site_list()
AtomSite[]	_EntryStub.get_atom_site_block_n(int from, int to)
int	_EntryStub.atom_site_ext_list_size()
AtomSiteExt[]	_EntryStub.get_atom_site_ext_list()
AtomSiteExt[]	_EntryStub.get_atom_site_ext_block_n(int from, int to)
int	_EntryStub.atom_site_anisotrop_list_size()
AtomSiteAnisotrop[]	_EntryStub.get_atom_site_anisotrop_list()
int	_EntryStub.atom_type_list_size()
AtomType[]	_EntryStub.get_atom_type_list()
int	_EntryStub.chem_comp_list_size()
ChemComp[]	_EntryStub.get_chem_comp_list()
int	_EntryStub.chem_comp_angle_list_size()
ChemCompAngle[]	_EntryStub.get_chem_comp_angle_list()
int	_EntryStub.chem_comp_atom_list_size()
ChemCompAtom[]	_EntryStub.get_chem_comp_atom_list()
int	_EntryStub.chem_comp_bond_list_size()
ChemCompBond[]	_EntryStub.get_chem_comp_bond_list()
int	_EntryStub.chem_comp_chir_list_size()
ChemCompChir[]	_EntryStub.get_chem_comp_chir_list()
int	_EntryStub.chem_comp_chir_atom_list_size()
ChemCompChirAtom[]	_EntryStub.get_chem_comp_chir_atom_list()
int	_EntryStub.chem_comp_link_list_size()
ChemCompLink[]	_EntryStub.get_chem_comp_link_list()
int	_EntryStub.chem_comp_plane_list_size()
ChemCompPlane[]	_EntryStub.get_chem_comp_plane_list()
int	_EntryStub.chem_comp_plane_atom_list_size()
ChemCompPlaneAtom[]	_EntryStub.get_chem_comp_plane_atom_list()
int	_EntryStub.chem_comp_tor_list_size()
ChemCompTor[]	_EntryStub.get_chem_comp_tor_list()
int	_EntryStub.chem_comp_tor_value_list_size()
ChemCompTorValue[]	_EntryStub.get_chem_comp_tor_value_list()
int	_EntryStub.chem_link_list_size()
ChemLink[]	_EntryStub.get_chem_link_list()
int	_EntryStub.chem_link_angle_list_size()
ChemLinkAngle[]	_EntryStub.get_chem_link_angle_list()
int	_EntryStub.chem_link_bond_list_size()
ChemLinkBond[]	_EntryStub.get_chem_link_bond_list()
int	_EntryStub.chem_link_chir_list_size()
ChemLinkChir[]	_EntryStub.get_chem_link_chir_list()
int	_EntryStub.chem_link_chir_atom_list_size()
ChemLinkChirAtom[]	_EntryStub.get_chem_link_chir_atom_list()
int	_EntryStub.chem_link_plane_list_size()
ChemLinkPlane[]	_EntryStub.get_chem_link_plane_list()
int	_EntryStub.chem_link_plane_atom_list_size()
ChemLinkPlaneAtom[]	_EntryStub.get_chem_link_plane_atom_list()
int	_EntryStub.chem_link_tor_list_size()
ChemLinkTor[]	_EntryStub.get_chem_link_tor_list()
int	_EntryStub.chem_link_tor_value_list_size()
ChemLinkTorValue[]	_EntryStub.get_chem_link_tor_value_list()
int	_EntryStub.entity_list_size()
Entity[]	_EntryStub.get_entity_list()
int	_EntryStub.entity_keywords_list_size()
EntityKeywords[]	_EntryStub.get_entity_keywords_list()
int	_EntryStub.entity_link_list_size()
EntityLink[]	_EntryStub.get_entity_link_list()
int	_EntryStub.entity_name_com_list_size()
EntityNameCom[]	_EntryStub.get_entity_name_com_list()
int	_EntryStub.entity_name_sys_list_size()
EntityNameSys[]	_EntryStub.get_entity_name_sys_list()
int	_EntryStub.entity_poly_list_size()
EntityPoly[]	_EntryStub.get_entity_poly_list()
int	_EntryStub.entity_poly_seq_list_size()
EntityPolySeq[]	_EntryStub.get_entity_poly_seq_list()
EntityPolySeq[]	_EntryStub.get_entity_poly_seq_block_n(int from, int to)
int	_EntryStub.entity_src_gen_list_size()
EntitySrcGen[]	_EntryStub.get_entity_src_gen_list()
int	_EntryStub.entity_src_nat_list_size()
EntitySrcNat[]	_EntryStub.get_entity_src_nat_list()
int	_EntryStub.pdbx_entity_name_list_size()
PdbxEntityName[]	_EntryStub.get_pdbx_entity_name_list()
int	_EntryStub.pdbx_prerelease_seq_list_size()
PdbxPrereleaseSeq[]	_EntryStub.get_pdbx_prerelease_seq_list()
int	_EntryStub.pdbx_poly_seq_scheme_list_size()
PdbxPolySeqScheme[]	_EntryStub.get_pdbx_poly_seq_scheme_list()
int	_EntryStub.pdbx_nonpoly_scheme_list_size()
PdbxNonpolyScheme[]	_EntryStub.get_pdbx_nonpoly_scheme_list()
int	_EntryStub.pdbx_entity_assembly_list_size()
PdbxEntityAssembly[]	_EntryStub.get_pdbx_entity_assembly_list()
int	_EntryStub.pdbx_entity_src_syn_list_size()
PdbxEntitySrcSyn[]	_EntryStub.get_pdbx_entity_src_syn_list()
int	_EntryStub.entry_link_list_size()
EntryLink[]	_EntryStub.get_entry_link_list()
int	_EntryStub.geom_list_size()
Geom[]	_EntryStub.get_geom_list()
int	_EntryStub.geom_angle_list_size()
GeomAngle[]	_EntryStub.get_geom_angle_list()
int	_EntryStub.geom_bond_list_size()
GeomBond[]	_EntryStub.get_geom_bond_list()
int	_EntryStub.geom_contact_list_size()
GeomContact[]	_EntryStub.get_geom_contact_list()
int	_EntryStub.geom_hbond_list_size()
GeomHbond[]	_EntryStub.get_geom_hbond_list()
int	_EntryStub.geom_torsion_list_size()
GeomTorsion[]	_EntryStub.get_geom_torsion_list()
int	_EntryStub.structure_list_size()
Structure[]	_EntryStub.get_structure_list()
int	_EntryStub.struct_asym_list_size()
StructAsym[]	_EntryStub.get_struct_asym_list()
int	_EntryStub.struct_biol_list_size()
StructBiol[]	_EntryStub.get_struct_biol_list()
int	_EntryStub.struct_biol_gen_list_size()
StructBiolGen[]	_EntryStub.get_struct_biol_gen_list()
int	_EntryStub.struct_biol_keywords_list_size()
StructBiolKeywords[]	_EntryStub.get_struct_biol_keywords_list()
int	_EntryStub.struct_biol_view_list_size()
StructBiolView[]	_EntryStub.get_struct_biol_view_list()
int	_EntryStub.struct_conf_list_size()
StructConf[]	_EntryStub.get_struct_conf_list()
int	_EntryStub.struct_conf_type_list_size()
StructConfType[]	_EntryStub.get_struct_conf_type_list()
int	_EntryStub.struct_conn_list_size()
StructConn[]	_EntryStub.get_struct_conn_list()
int	_EntryStub.struct_conn_type_list_size()
StructConnType[]	_EntryStub.get_struct_conn_type_list()
int	_EntryStub.struct_keywords_list_size()
StructKeywords[]	_EntryStub.get_struct_keywords_list()
int	_EntryStub.struct_mon_details_list_size()
StructMonDetails[]	_EntryStub.get_struct_mon_details_list()
int	_EntryStub.struct_mon_nucl_list_size()
StructMonNucl[]	_EntryStub.get_struct_mon_nucl_list()
int	_EntryStub.struct_mon_prot_list_size()
StructMonProt[]	_EntryStub.get_struct_mon_prot_list()
int	_EntryStub.struct_mon_prot_cis_list_size()
StructMonProtCis[]	_EntryStub.get_struct_mon_prot_cis_list()
int	_EntryStub.struct_ncs_dom_list_size()
StructNcsDom[]	_EntryStub.get_struct_ncs_dom_list()
int	_EntryStub.struct_ncs_dom_lim_list_size()
StructNcsDomLim[]	_EntryStub.get_struct_ncs_dom_lim_list()
int	_EntryStub.struct_ncs_ens_list_size()
StructNcsEns[]	_EntryStub.get_struct_ncs_ens_list()
int	_EntryStub.struct_ncs_ens_gen_list_size()
StructNcsEnsGen[]	_EntryStub.get_struct_ncs_ens_gen_list()
int	_EntryStub.struct_ncs_oper_list_size()
StructNcsOper[]	_EntryStub.get_struct_ncs_oper_list()
int	_EntryStub.struct_ref_list_size()
StructRef[]	_EntryStub.get_struct_ref_list()
int	_EntryStub.struct_ref_seq_list_size()
StructRefSeq[]	_EntryStub.get_struct_ref_seq_list()
int	_EntryStub.struct_ref_seq_dif_list_size()
StructRefSeqDif[]	_EntryStub.get_struct_ref_seq_dif_list()
int	_EntryStub.struct_sheet_list_size()
StructSheet[]	_EntryStub.get_struct_sheet_list()
int	_EntryStub.struct_sheet_hbond_list_size()
StructSheetHbond[]	_EntryStub.get_struct_sheet_hbond_list()
int	_EntryStub.pdbx_struct_sheet_hbond_list_size()
PdbxStructSheetHbond[]	_EntryStub.get_pdbx_struct_sheet_hbond_list()
int	_EntryStub.struct_sheet_order_list_size()
StructSheetOrder[]	_EntryStub.get_struct_sheet_order_list()
int	_EntryStub.struct_sheet_range_list_size()
StructSheetRange[]	_EntryStub.get_struct_sheet_range_list()
int	_EntryStub.struct_sheet_topology_list_size()
StructSheetTopology[]	_EntryStub.get_struct_sheet_topology_list()
int	_EntryStub.struct_site_list_size()
StructSite[]	_EntryStub.get_struct_site_list()
int	_EntryStub.struct_site_gen_list_size()
StructSiteGen[]	_EntryStub.get_struct_site_gen_list()
int	_EntryStub.struct_site_keywords_list_size()
StructSiteKeywords[]	_EntryStub.get_struct_site_keywords_list()
int	_EntryStub.struct_site_view_list_size()
StructSiteView[]	_EntryStub.get_struct_site_view_list()
java.lang.String[]	_EntryFactoryStub.get_entry_id_list()
int	_EntryFactoryStub.get_entry_id_list_size()
java.lang.String[]	_EntryFactoryStub.get_entry_id_list_block_n(int from, int to)
ModificationDate[]	_EntryFactoryStub.get_entry_modification_dates()
ModificationDate[]	_EntryFactoryStub.get_entry_modification_dates_block_n(int from, int to)
java.lang.String[]	_EntryFactoryStub.get_entry_group_list()
java.lang.String[]	_EntryFactoryStub.get_entries_in_group(java.lang.String group)
Entry	_EntryFactoryStub.get_entry_from_id(java.lang.String entry_id)
java.lang.String[]	_EntryFactoryStub.native_formats_supported()
byte[]	_EntryFactoryStub.get_native_entry_representation(java.lang.String format, java.lang.String entry_id)
byte[]	EntryOperations.get_presence_flags()
org.omg.CosPropertyService.Property[]	EntryOperations.get_subentry_list()
int	EntryOperations.atom_site_list_size()
AtomSite[]	EntryOperations.get_atom_site_list()
AtomSite[]	EntryOperations.get_atom_site_block_n(int from, int to)
int	EntryOperations.atom_site_ext_list_size()
AtomSiteExt[]	EntryOperations.get_atom_site_ext_list()
AtomSiteExt[]	EntryOperations.get_atom_site_ext_block_n(int from, int to)
int	EntryOperations.atom_site_anisotrop_list_size()
AtomSiteAnisotrop[]	EntryOperations.get_atom_site_anisotrop_list()
int	EntryOperations.atom_type_list_size()
AtomType[]	EntryOperations.get_atom_type_list()
int	EntryOperations.chem_comp_list_size()
ChemComp[]	EntryOperations.get_chem_comp_list()
int	EntryOperations.chem_comp_angle_list_size()
ChemCompAngle[]	EntryOperations.get_chem_comp_angle_list()
int	EntryOperations.chem_comp_atom_list_size()
ChemCompAtom[]	EntryOperations.get_chem_comp_atom_list()
int	EntryOperations.chem_comp_bond_list_size()
ChemCompBond[]	EntryOperations.get_chem_comp_bond_list()
int	EntryOperations.chem_comp_chir_list_size()
ChemCompChir[]	EntryOperations.get_chem_comp_chir_list()
int	EntryOperations.chem_comp_chir_atom_list_size()
ChemCompChirAtom[]	EntryOperations.get_chem_comp_chir_atom_list()
int	EntryOperations.chem_comp_link_list_size()
ChemCompLink[]	EntryOperations.get_chem_comp_link_list()
int	EntryOperations.chem_comp_plane_list_size()
ChemCompPlane[]	EntryOperations.get_chem_comp_plane_list()
int	EntryOperations.chem_comp_plane_atom_list_size()
ChemCompPlaneAtom[]	EntryOperations.get_chem_comp_plane_atom_list()
int	EntryOperations.chem_comp_tor_list_size()
ChemCompTor[]	EntryOperations.get_chem_comp_tor_list()
int	EntryOperations.chem_comp_tor_value_list_size()
ChemCompTorValue[]	EntryOperations.get_chem_comp_tor_value_list()
int	EntryOperations.chem_link_list_size()
ChemLink[]	EntryOperations.get_chem_link_list()
int	EntryOperations.chem_link_angle_list_size()
ChemLinkAngle[]	EntryOperations.get_chem_link_angle_list()
int	EntryOperations.chem_link_bond_list_size()
ChemLinkBond[]	EntryOperations.get_chem_link_bond_list()
int	EntryOperations.chem_link_chir_list_size()
ChemLinkChir[]	EntryOperations.get_chem_link_chir_list()
int	EntryOperations.chem_link_chir_atom_list_size()
ChemLinkChirAtom[]	EntryOperations.get_chem_link_chir_atom_list()
int	EntryOperations.chem_link_plane_list_size()
ChemLinkPlane[]	EntryOperations.get_chem_link_plane_list()
int	EntryOperations.chem_link_plane_atom_list_size()
ChemLinkPlaneAtom[]	EntryOperations.get_chem_link_plane_atom_list()
int	EntryOperations.chem_link_tor_list_size()
ChemLinkTor[]	EntryOperations.get_chem_link_tor_list()
int	EntryOperations.chem_link_tor_value_list_size()
ChemLinkTorValue[]	EntryOperations.get_chem_link_tor_value_list()
int	EntryOperations.entity_list_size()
Entity[]	EntryOperations.get_entity_list()
int	EntryOperations.entity_keywords_list_size()
EntityKeywords[]	EntryOperations.get_entity_keywords_list()
int	EntryOperations.entity_link_list_size()
EntityLink[]	EntryOperations.get_entity_link_list()
int	EntryOperations.entity_name_com_list_size()
EntityNameCom[]	EntryOperations.get_entity_name_com_list()
int	EntryOperations.entity_name_sys_list_size()
EntityNameSys[]	EntryOperations.get_entity_name_sys_list()
int	EntryOperations.entity_poly_list_size()
EntityPoly[]	EntryOperations.get_entity_poly_list()
int	EntryOperations.entity_poly_seq_list_size()
EntityPolySeq[]	EntryOperations.get_entity_poly_seq_list()
EntityPolySeq[]	EntryOperations.get_entity_poly_seq_block_n(int from, int to)
int	EntryOperations.entity_src_gen_list_size()
EntitySrcGen[]	EntryOperations.get_entity_src_gen_list()
int	EntryOperations.entity_src_nat_list_size()
EntitySrcNat[]	EntryOperations.get_entity_src_nat_list()
int	EntryOperations.pdbx_entity_name_list_size()
PdbxEntityName[]	EntryOperations.get_pdbx_entity_name_list()
int	EntryOperations.pdbx_prerelease_seq_list_size()
PdbxPrereleaseSeq[]	EntryOperations.get_pdbx_prerelease_seq_list()
int	EntryOperations.pdbx_poly_seq_scheme_list_size()
PdbxPolySeqScheme[]	EntryOperations.get_pdbx_poly_seq_scheme_list()
int	EntryOperations.pdbx_nonpoly_scheme_list_size()
PdbxNonpolyScheme[]	EntryOperations.get_pdbx_nonpoly_scheme_list()
int	EntryOperations.pdbx_entity_assembly_list_size()
PdbxEntityAssembly[]	EntryOperations.get_pdbx_entity_assembly_list()
int	EntryOperations.pdbx_entity_src_syn_list_size()
PdbxEntitySrcSyn[]	EntryOperations.get_pdbx_entity_src_syn_list()
int	EntryOperations.entry_link_list_size()
EntryLink[]	EntryOperations.get_entry_link_list()
int	EntryOperations.geom_list_size()
Geom[]	EntryOperations.get_geom_list()
int	EntryOperations.geom_angle_list_size()
GeomAngle[]	EntryOperations.get_geom_angle_list()
int	EntryOperations.geom_bond_list_size()
GeomBond[]	EntryOperations.get_geom_bond_list()
int	EntryOperations.geom_contact_list_size()
GeomContact[]	EntryOperations.get_geom_contact_list()
int	EntryOperations.geom_hbond_list_size()
GeomHbond[]	EntryOperations.get_geom_hbond_list()
int	EntryOperations.geom_torsion_list_size()
GeomTorsion[]	EntryOperations.get_geom_torsion_list()
int	EntryOperations.structure_list_size()
Structure[]	EntryOperations.get_structure_list()
int	EntryOperations.struct_asym_list_size()
StructAsym[]	EntryOperations.get_struct_asym_list()
int	EntryOperations.struct_biol_list_size()
StructBiol[]	EntryOperations.get_struct_biol_list()
int	EntryOperations.struct_biol_gen_list_size()
StructBiolGen[]	EntryOperations.get_struct_biol_gen_list()
int	EntryOperations.struct_biol_keywords_list_size()
StructBiolKeywords[]	EntryOperations.get_struct_biol_keywords_list()
int	EntryOperations.struct_biol_view_list_size()
StructBiolView[]	EntryOperations.get_struct_biol_view_list()
int	EntryOperations.struct_conf_list_size()
StructConf[]	EntryOperations.get_struct_conf_list()
int	EntryOperations.struct_conf_type_list_size()
StructConfType[]	EntryOperations.get_struct_conf_type_list()
int	EntryOperations.struct_conn_list_size()
StructConn[]	EntryOperations.get_struct_conn_list()
int	EntryOperations.struct_conn_type_list_size()
StructConnType[]	EntryOperations.get_struct_conn_type_list()
int	EntryOperations.struct_keywords_list_size()
StructKeywords[]	EntryOperations.get_struct_keywords_list()
int	EntryOperations.struct_mon_details_list_size()
StructMonDetails[]	EntryOperations.get_struct_mon_details_list()
int	EntryOperations.struct_mon_nucl_list_size()
StructMonNucl[]	EntryOperations.get_struct_mon_nucl_list()
int	EntryOperations.struct_mon_prot_list_size()
StructMonProt[]	EntryOperations.get_struct_mon_prot_list()
int	EntryOperations.struct_mon_prot_cis_list_size()
StructMonProtCis[]	EntryOperations.get_struct_mon_prot_cis_list()
int	EntryOperations.struct_ncs_dom_list_size()
StructNcsDom[]	EntryOperations.get_struct_ncs_dom_list()
int	EntryOperations.struct_ncs_dom_lim_list_size()
StructNcsDomLim[]	EntryOperations.get_struct_ncs_dom_lim_list()
int	EntryOperations.struct_ncs_ens_list_size()
StructNcsEns[]	EntryOperations.get_struct_ncs_ens_list()
int	EntryOperations.struct_ncs_ens_gen_list_size()
StructNcsEnsGen[]	EntryOperations.get_struct_ncs_ens_gen_list()
int	EntryOperations.struct_ncs_oper_list_size()
StructNcsOper[]	EntryOperations.get_struct_ncs_oper_list()
int	EntryOperations.struct_ref_list_size()
StructRef[]	EntryOperations.get_struct_ref_list()
int	EntryOperations.struct_ref_seq_list_size()
StructRefSeq[]	EntryOperations.get_struct_ref_seq_list()
int	EntryOperations.struct_ref_seq_dif_list_size()
StructRefSeqDif[]	EntryOperations.get_struct_ref_seq_dif_list()
int	EntryOperations.struct_sheet_list_size()
StructSheet[]	EntryOperations.get_struct_sheet_list()
int	EntryOperations.struct_sheet_hbond_list_size()
StructSheetHbond[]	EntryOperations.get_struct_sheet_hbond_list()
int	EntryOperations.pdbx_struct_sheet_hbond_list_size()
PdbxStructSheetHbond[]	EntryOperations.get_pdbx_struct_sheet_hbond_list()
int	EntryOperations.struct_sheet_order_list_size()
StructSheetOrder[]	EntryOperations.get_struct_sheet_order_list()
int	EntryOperations.struct_sheet_range_list_size()
StructSheetRange[]	EntryOperations.get_struct_sheet_range_list()
int	EntryOperations.struct_sheet_topology_list_size()
StructSheetTopology[]	EntryOperations.get_struct_sheet_topology_list()
int	EntryOperations.struct_site_list_size()
StructSite[]	EntryOperations.get_struct_site_list()
int	EntryOperations.struct_site_gen_list_size()
StructSiteGen[]	EntryOperations.get_struct_site_gen_list()
int	EntryOperations.struct_site_keywords_list_size()
StructSiteKeywords[]	EntryOperations.get_struct_site_keywords_list()
int	EntryOperations.struct_site_view_list_size()
StructSiteView[]	EntryOperations.get_struct_site_view_list()
java.lang.String[]	EntryFactoryOperations.get_entry_id_list()
int	EntryFactoryOperations.get_entry_id_list_size()
java.lang.String[]	EntryFactoryOperations.get_entry_id_list_block_n(int from, int to)
ModificationDate[]	EntryFactoryOperations.get_entry_modification_dates()
ModificationDate[]	EntryFactoryOperations.get_entry_modification_dates_block_n(int from, int to)
java.lang.String[]	EntryFactoryOperations.get_entry_group_list()
java.lang.String[]	EntryFactoryOperations.get_entries_in_group(java.lang.String group)
Entry	EntryFactoryOperations.get_entry_from_id(java.lang.String entry_id)
java.lang.String[]	EntryFactoryOperations.native_formats_supported()
byte[]	EntryFactoryOperations.get_native_entry_representation(java.lang.String format, java.lang.String entry_id)

Constructors in org.omg.DsLSRMacromolecularStructure with parameters of type DataAccessException

DataAccessExceptionHolder(DataAccessException initialValue)

Uses of DataAccessException in org.omg.DsLSRMmsReference

Methods in org.omg.DsLSRMmsReference that throw DataAccessException

byte[]	_MmsReferenceEntryStub.get_presence_flags()
int	_MmsReferenceEntryStub.citation_list_size()
Citation[]	_MmsReferenceEntryStub.get_citation_list()
int	_MmsReferenceEntryStub.citation_author_list_size()
CitationAuthor[]	_MmsReferenceEntryStub.get_citation_author_list()
int	_MmsReferenceEntryStub.citation_editor_list_size()
CitationEditor[]	_MmsReferenceEntryStub.get_citation_editor_list()
int	_MmsReferenceEntryStub.database_list_size()
Database[]	_MmsReferenceEntryStub.get_database_list()
int	_MmsReferenceEntryStub.database_pdb_caveat_list_size()
DatabasePdbCaveat[]	_MmsReferenceEntryStub.get_database_pdb_caveat_list()
int	_MmsReferenceEntryStub.database_pdb_matrix_list_size()
DatabasePdbMatrix[]	_MmsReferenceEntryStub.get_database_pdb_matrix_list()
int	_MmsReferenceEntryStub.database_pdb_remark_list_size()
DatabasePdbRemark[]	_MmsReferenceEntryStub.get_database_pdb_remark_list()
int	_MmsReferenceEntryStub.database_pdb_rev_list_size()
DatabasePdbRev[]	_MmsReferenceEntryStub.get_database_pdb_rev_list()
int	_MmsReferenceEntryStub.database_pdb_rev_record_list_size()
DatabasePdbRevRecord[]	_MmsReferenceEntryStub.get_database_pdb_rev_record_list()
int	_MmsReferenceEntryStub.database_pdb_tvect_list_size()
DatabasePdbTvect[]	_MmsReferenceEntryStub.get_database_pdb_tvect_list()
int	_MmsReferenceEntryStub.pdbx_database_message_list_size()
PdbxDatabaseMessage[]	_MmsReferenceEntryStub.get_pdbx_database_message_list()
int	_MmsReferenceEntryStub.pdbx_database_pdb_obs_spr_list_size()
PdbxDatabasePdbObsSpr[]	_MmsReferenceEntryStub.get_pdbx_database_pdb_obs_spr_list()
int	_MmsReferenceEntryStub.pdbx_database_proc_list_size()
PdbxDatabaseProc[]	_MmsReferenceEntryStub.get_pdbx_database_proc_list()
int	_MmsReferenceEntryStub.pdbx_database_remark_list_size()
PdbxDatabaseRemark[]	_MmsReferenceEntryStub.get_pdbx_database_remark_list()
int	_MmsReferenceEntryStub.pdbx_database_status_list_size()
PdbxDatabaseStatus[]	_MmsReferenceEntryStub.get_pdbx_database_status_list()
int	_MmsReferenceEntryStub.pdbx_database_related_list_size()
PdbxDatabaseRelated[]	_MmsReferenceEntryStub.get_pdbx_database_related_list()
int	_MmsReferenceEntryStub.computing_list_size()
Computing[]	_MmsReferenceEntryStub.get_computing_list()
int	_MmsReferenceEntryStub.software_list_size()
Software[]	_MmsReferenceEntryStub.get_software_list()
byte[]	MmsReferenceEntryOperations.get_presence_flags()
int	MmsReferenceEntryOperations.citation_list_size()
Citation[]	MmsReferenceEntryOperations.get_citation_list()
int	MmsReferenceEntryOperations.citation_author_list_size()
CitationAuthor[]	MmsReferenceEntryOperations.get_citation_author_list()
int	MmsReferenceEntryOperations.citation_editor_list_size()
CitationEditor[]	MmsReferenceEntryOperations.get_citation_editor_list()
int	MmsReferenceEntryOperations.database_list_size()
Database[]	MmsReferenceEntryOperations.get_database_list()
int	MmsReferenceEntryOperations.database_pdb_caveat_list_size()
DatabasePdbCaveat[]	MmsReferenceEntryOperations.get_database_pdb_caveat_list()
int	MmsReferenceEntryOperations.database_pdb_matrix_list_size()
DatabasePdbMatrix[]	MmsReferenceEntryOperations.get_database_pdb_matrix_list()
int	MmsReferenceEntryOperations.database_pdb_remark_list_size()
DatabasePdbRemark[]	MmsReferenceEntryOperations.get_database_pdb_remark_list()
int	MmsReferenceEntryOperations.database_pdb_rev_list_size()
DatabasePdbRev[]	MmsReferenceEntryOperations.get_database_pdb_rev_list()
int	MmsReferenceEntryOperations.database_pdb_rev_record_list_size()
DatabasePdbRevRecord[]	MmsReferenceEntryOperations.get_database_pdb_rev_record_list()
int	MmsReferenceEntryOperations.database_pdb_tvect_list_size()
DatabasePdbTvect[]	MmsReferenceEntryOperations.get_database_pdb_tvect_list()
int	MmsReferenceEntryOperations.pdbx_database_message_list_size()
PdbxDatabaseMessage[]	MmsReferenceEntryOperations.get_pdbx_database_message_list()
int	MmsReferenceEntryOperations.pdbx_database_pdb_obs_spr_list_size()
PdbxDatabasePdbObsSpr[]	MmsReferenceEntryOperations.get_pdbx_database_pdb_obs_spr_list()
int	MmsReferenceEntryOperations.pdbx_database_proc_list_size()
PdbxDatabaseProc[]	MmsReferenceEntryOperations.get_pdbx_database_proc_list()
int	MmsReferenceEntryOperations.pdbx_database_remark_list_size()
PdbxDatabaseRemark[]	MmsReferenceEntryOperations.get_pdbx_database_remark_list()
int	MmsReferenceEntryOperations.pdbx_database_status_list_size()
PdbxDatabaseStatus[]	MmsReferenceEntryOperations.get_pdbx_database_status_list()
int	MmsReferenceEntryOperations.pdbx_database_related_list_size()
PdbxDatabaseRelated[]	MmsReferenceEntryOperations.get_pdbx_database_related_list()
int	MmsReferenceEntryOperations.computing_list_size()
Computing[]	MmsReferenceEntryOperations.get_computing_list()
int	MmsReferenceEntryOperations.software_list_size()
Software[]	MmsReferenceEntryOperations.get_software_list()

Uses of DataAccessException in org.omg.DsLSRXRayCrystallography

Methods in org.omg.DsLSRXRayCrystallography that throw DataAccessException

byte[]	_XRayCrystallographyEntryStub.get_presence_flags()
int	_XRayCrystallographyEntryStub.atom_sites_list_size()
AtomSites[]	_XRayCrystallographyEntryStub.get_atom_sites_list()
int	_XRayCrystallographyEntryStub.atom_sites_alt_list_size()
AtomSitesAlt[]	_XRayCrystallographyEntryStub.get_atom_sites_alt_list()
int	_XRayCrystallographyEntryStub.atom_sites_alt_ens_list_size()
AtomSitesAltEns[]	_XRayCrystallographyEntryStub.get_atom_sites_alt_ens_list()
int	_XRayCrystallographyEntryStub.atom_sites_alt_gen_list_size()
AtomSitesAltGen[]	_XRayCrystallographyEntryStub.get_atom_sites_alt_gen_list()
int	_XRayCrystallographyEntryStub.atom_sites_footnote_list_size()
AtomSitesFootnote[]	_XRayCrystallographyEntryStub.get_atom_sites_footnote_list()
int	_XRayCrystallographyEntryStub.cell_list_size()
Cell[]	_XRayCrystallographyEntryStub.get_cell_list()
int	_XRayCrystallographyEntryStub.cell_measurement_list_size()
CellMeasurement[]	_XRayCrystallographyEntryStub.get_cell_measurement_list()
int	_XRayCrystallographyEntryStub.cell_measurement_refln_list_size()
CellMeasurementRefln[]	_XRayCrystallographyEntryStub.get_cell_measurement_refln_list()
int	_XRayCrystallographyEntryStub.diffrn_list_size()
Diffrn[]	_XRayCrystallographyEntryStub.get_diffrn_list()
int	_XRayCrystallographyEntryStub.diffrn_attenuator_list_size()
DiffrnAttenuator[]	_XRayCrystallographyEntryStub.get_diffrn_attenuator_list()
int	_XRayCrystallographyEntryStub.diffrn_detector_list_size()
DiffrnDetector[]	_XRayCrystallographyEntryStub.get_diffrn_detector_list()
int	_XRayCrystallographyEntryStub.diffrn_measurement_list_size()
DiffrnMeasurement[]	_XRayCrystallographyEntryStub.get_diffrn_measurement_list()
int	_XRayCrystallographyEntryStub.diffrn_orient_matrix_list_size()
DiffrnOrientMatrix[]	_XRayCrystallographyEntryStub.get_diffrn_orient_matrix_list()
int	_XRayCrystallographyEntryStub.diffrn_orient_refln_list_size()
DiffrnOrientRefln[]	_XRayCrystallographyEntryStub.get_diffrn_orient_refln_list()
int	_XRayCrystallographyEntryStub.diffrn_radiation_list_size()
DiffrnRadiation[]	_XRayCrystallographyEntryStub.get_diffrn_radiation_list()
int	_XRayCrystallographyEntryStub.diffrn_radiation_wavelength_list_size()
DiffrnRadiationWavelength[]	_XRayCrystallographyEntryStub.get_diffrn_radiation_wavelength_list()
int	_XRayCrystallographyEntryStub.diffrn_refln_list_size()
DiffrnRefln[]	_XRayCrystallographyEntryStub.get_diffrn_refln_list()
int	_XRayCrystallographyEntryStub.diffrn_reflns_list_size()
DiffrnReflns[]	_XRayCrystallographyEntryStub.get_diffrn_reflns_list()
int	_XRayCrystallographyEntryStub.diffrn_scale_group_list_size()
DiffrnScaleGroup[]	_XRayCrystallographyEntryStub.get_diffrn_scale_group_list()
int	_XRayCrystallographyEntryStub.diffrn_source_list_size()
DiffrnSource[]	_XRayCrystallographyEntryStub.get_diffrn_source_list()
int	_XRayCrystallographyEntryStub.diffrn_standard_refln_list_size()
DiffrnStandardRefln[]	_XRayCrystallographyEntryStub.get_diffrn_standard_refln_list()
int	_XRayCrystallographyEntryStub.diffrn_standards_list_size()
DiffrnStandards[]	_XRayCrystallographyEntryStub.get_diffrn_standards_list()
int	_XRayCrystallographyEntryStub.exptl_list_size()
Exptl[]	_XRayCrystallographyEntryStub.get_exptl_list()
int	_XRayCrystallographyEntryStub.exptl_crystal_list_size()
ExptlCrystal[]	_XRayCrystallographyEntryStub.get_exptl_crystal_list()
int	_XRayCrystallographyEntryStub.exptl_crystal_face_list_size()
ExptlCrystalFace[]	_XRayCrystallographyEntryStub.get_exptl_crystal_face_list()
int	_XRayCrystallographyEntryStub.exptl_crystal_grow_list_size()
ExptlCrystalGrow[]	_XRayCrystallographyEntryStub.get_exptl_crystal_grow_list()
int	_XRayCrystallographyEntryStub.exptl_crystal_grow_comp_list_size()
ExptlCrystalGrowComp[]	_XRayCrystallographyEntryStub.get_exptl_crystal_grow_comp_list()
int	_XRayCrystallographyEntryStub.phasing_list_size()
Phasing[]	_XRayCrystallographyEntryStub.get_phasing_list()
int	_XRayCrystallographyEntryStub.phasing_averaging_list_size()
PhasingAveraging[]	_XRayCrystallographyEntryStub.get_phasing_averaging_list()
int	_XRayCrystallographyEntryStub.phasing_isomorphous_list_size()
PhasingIsomorphous[]	_XRayCrystallographyEntryStub.get_phasing_isomorphous_list()
int	_XRayCrystallographyEntryStub.phasing_mad_list_size()
PhasingMad[]	_XRayCrystallographyEntryStub.get_phasing_mad_list()
int	_XRayCrystallographyEntryStub.phasing_mad_clust_list_size()
PhasingMadClust[]	_XRayCrystallographyEntryStub.get_phasing_mad_clust_list()
int	_XRayCrystallographyEntryStub.phasing_mad_expt_list_size()
PhasingMadExpt[]	_XRayCrystallographyEntryStub.get_phasing_mad_expt_list()
int	_XRayCrystallographyEntryStub.phasing_mad_ratio_list_size()
PhasingMadRatio[]	_XRayCrystallographyEntryStub.get_phasing_mad_ratio_list()
int	_XRayCrystallographyEntryStub.phasing_mad_set_list_size()
PhasingMadSet[]	_XRayCrystallographyEntryStub.get_phasing_mad_set_list()
int	_XRayCrystallographyEntryStub.phasing_mir_list_size()
PhasingMir[]	_XRayCrystallographyEntryStub.get_phasing_mir_list()
int	_XRayCrystallographyEntryStub.phasing_mir_der_list_size()
PhasingMirDer[]	_XRayCrystallographyEntryStub.get_phasing_mir_der_list()
int	_XRayCrystallographyEntryStub.phasing_mir_der_refln_list_size()
PhasingMirDerRefln[]	_XRayCrystallographyEntryStub.get_phasing_mir_der_refln_list()
int	_XRayCrystallographyEntryStub.phasing_mir_der_shell_list_size()
PhasingMirDerShell[]	_XRayCrystallographyEntryStub.get_phasing_mir_der_shell_list()
int	_XRayCrystallographyEntryStub.phasing_mir_der_site_list_size()
PhasingMirDerSite[]	_XRayCrystallographyEntryStub.get_phasing_mir_der_site_list()
int	_XRayCrystallographyEntryStub.phasing_mir_shell_list_size()
PhasingMirShell[]	_XRayCrystallographyEntryStub.get_phasing_mir_shell_list()
int	_XRayCrystallographyEntryStub.phasing_set_list_size()
PhasingSet[]	_XRayCrystallographyEntryStub.get_phasing_set_list()
int	_XRayCrystallographyEntryStub.phasing_set_refln_list_size()
PhasingSetRefln[]	_XRayCrystallographyEntryStub.get_phasing_set_refln_list()
int	_XRayCrystallographyEntryStub.refine_list_size()
Refine[]	_XRayCrystallographyEntryStub.get_refine_list()
int	_XRayCrystallographyEntryStub.refine_analyze_list_size()
RefineAnalyze[]	_XRayCrystallographyEntryStub.get_refine_analyze_list()
int	_XRayCrystallographyEntryStub.refine_b_iso_list_size()
RefineBIso[]	_XRayCrystallographyEntryStub.get_refine_b_iso_list()
int	_XRayCrystallographyEntryStub.refine_hist_list_size()
RefineHist[]	_XRayCrystallographyEntryStub.get_refine_hist_list()
int	_XRayCrystallographyEntryStub.refine_ls_restr_list_size()
RefineLsRestr[]	_XRayCrystallographyEntryStub.get_refine_ls_restr_list()
int	_XRayCrystallographyEntryStub.refine_ls_restr_ncs_list_size()
RefineLsRestrNcs[]	_XRayCrystallographyEntryStub.get_refine_ls_restr_ncs_list()
int	_XRayCrystallographyEntryStub.refine_ls_shell_list_size()
RefineLsShell[]	_XRayCrystallographyEntryStub.get_refine_ls_shell_list()
int	_XRayCrystallographyEntryStub.refine_occupancy_list_size()
RefineOccupancy[]	_XRayCrystallographyEntryStub.get_refine_occupancy_list()
int	_XRayCrystallographyEntryStub.pdbx_refine_list_size()
PdbxRefine[]	_XRayCrystallographyEntryStub.get_pdbx_refine_list()
int	_XRayCrystallographyEntryStub.pdbx_xplor_file_list_size()
PdbxXplorFile[]	_XRayCrystallographyEntryStub.get_pdbx_xplor_file_list()
int	_XRayCrystallographyEntryStub.pdbx_refine_aux_file_list_size()
PdbxRefineAuxFile[]	_XRayCrystallographyEntryStub.get_pdbx_refine_aux_file_list()
int	_XRayCrystallographyEntryStub.pdbx_refine_tls_list_size()
PdbxRefineTls[]	_XRayCrystallographyEntryStub.get_pdbx_refine_tls_list()
int	_XRayCrystallographyEntryStub.pdbx_refine_tls_group_list_size()
PdbxRefineTlsGroup[]	_XRayCrystallographyEntryStub.get_pdbx_refine_tls_group_list()
int	_XRayCrystallographyEntryStub.refln_list_size()
Refln[]	_XRayCrystallographyEntryStub.get_refln_list()
int	_XRayCrystallographyEntryStub.reflns_list_size()
Reflns[]	_XRayCrystallographyEntryStub.get_reflns_list()
int	_XRayCrystallographyEntryStub.reflns_scale_list_size()
ReflnsScale[]	_XRayCrystallographyEntryStub.get_reflns_scale_list()
int	_XRayCrystallographyEntryStub.reflns_shell_list_size()
ReflnsShell[]	_XRayCrystallographyEntryStub.get_reflns_shell_list()
int	_XRayCrystallographyEntryStub.symmetry_list_size()
Symmetry[]	_XRayCrystallographyEntryStub.get_symmetry_list()
int	_XRayCrystallographyEntryStub.symmetry_equiv_list_size()
SymmetryEquiv[]	_XRayCrystallographyEntryStub.get_symmetry_equiv_list()
byte[]	XRayCrystallographyEntryOperations.get_presence_flags()
int	XRayCrystallographyEntryOperations.atom_sites_list_size()
AtomSites[]	XRayCrystallographyEntryOperations.get_atom_sites_list()
int	XRayCrystallographyEntryOperations.atom_sites_alt_list_size()
AtomSitesAlt[]	XRayCrystallographyEntryOperations.get_atom_sites_alt_list()
int	XRayCrystallographyEntryOperations.atom_sites_alt_ens_list_size()
AtomSitesAltEns[]	XRayCrystallographyEntryOperations.get_atom_sites_alt_ens_list()
int	XRayCrystallographyEntryOperations.atom_sites_alt_gen_list_size()
AtomSitesAltGen[]	XRayCrystallographyEntryOperations.get_atom_sites_alt_gen_list()
int	XRayCrystallographyEntryOperations.atom_sites_footnote_list_size()
AtomSitesFootnote[]	XRayCrystallographyEntryOperations.get_atom_sites_footnote_list()
int	XRayCrystallographyEntryOperations.cell_list_size()
Cell[]	XRayCrystallographyEntryOperations.get_cell_list()
int	XRayCrystallographyEntryOperations.cell_measurement_list_size()
CellMeasurement[]	XRayCrystallographyEntryOperations.get_cell_measurement_list()
int	XRayCrystallographyEntryOperations.cell_measurement_refln_list_size()
CellMeasurementRefln[]	XRayCrystallographyEntryOperations.get_cell_measurement_refln_list()
int	XRayCrystallographyEntryOperations.diffrn_list_size()
Diffrn[]	XRayCrystallographyEntryOperations.get_diffrn_list()
int	XRayCrystallographyEntryOperations.diffrn_attenuator_list_size()
DiffrnAttenuator[]	XRayCrystallographyEntryOperations.get_diffrn_attenuator_list()
int	XRayCrystallographyEntryOperations.diffrn_detector_list_size()
DiffrnDetector[]	XRayCrystallographyEntryOperations.get_diffrn_detector_list()
int	XRayCrystallographyEntryOperations.diffrn_measurement_list_size()
DiffrnMeasurement[]	XRayCrystallographyEntryOperations.get_diffrn_measurement_list()
int	XRayCrystallographyEntryOperations.diffrn_orient_matrix_list_size()
DiffrnOrientMatrix[]	XRayCrystallographyEntryOperations.get_diffrn_orient_matrix_list()
int	XRayCrystallographyEntryOperations.diffrn_orient_refln_list_size()
DiffrnOrientRefln[]	XRayCrystallographyEntryOperations.get_diffrn_orient_refln_list()
int	XRayCrystallographyEntryOperations.diffrn_radiation_list_size()
DiffrnRadiation[]	XRayCrystallographyEntryOperations.get_diffrn_radiation_list()
int	XRayCrystallographyEntryOperations.diffrn_radiation_wavelength_list_size()
DiffrnRadiationWavelength[]	XRayCrystallographyEntryOperations.get_diffrn_radiation_wavelength_list()
int	XRayCrystallographyEntryOperations.diffrn_refln_list_size()
DiffrnRefln[]	XRayCrystallographyEntryOperations.get_diffrn_refln_list()
int	XRayCrystallographyEntryOperations.diffrn_reflns_list_size()
DiffrnReflns[]	XRayCrystallographyEntryOperations.get_diffrn_reflns_list()
int	XRayCrystallographyEntryOperations.diffrn_scale_group_list_size()
DiffrnScaleGroup[]	XRayCrystallographyEntryOperations.get_diffrn_scale_group_list()
int	XRayCrystallographyEntryOperations.diffrn_source_list_size()
DiffrnSource[]	XRayCrystallographyEntryOperations.get_diffrn_source_list()
int	XRayCrystallographyEntryOperations.diffrn_standard_refln_list_size()
DiffrnStandardRefln[]	XRayCrystallographyEntryOperations.get_diffrn_standard_refln_list()
int	XRayCrystallographyEntryOperations.diffrn_standards_list_size()
DiffrnStandards[]	XRayCrystallographyEntryOperations.get_diffrn_standards_list()
int	XRayCrystallographyEntryOperations.exptl_list_size()
Exptl[]	XRayCrystallographyEntryOperations.get_exptl_list()
int	XRayCrystallographyEntryOperations.exptl_crystal_list_size()
ExptlCrystal[]	XRayCrystallographyEntryOperations.get_exptl_crystal_list()
int	XRayCrystallographyEntryOperations.exptl_crystal_face_list_size()
ExptlCrystalFace[]	XRayCrystallographyEntryOperations.get_exptl_crystal_face_list()
int	XRayCrystallographyEntryOperations.exptl_crystal_grow_list_size()
ExptlCrystalGrow[]	XRayCrystallographyEntryOperations.get_exptl_crystal_grow_list()
int	XRayCrystallographyEntryOperations.exptl_crystal_grow_comp_list_size()
ExptlCrystalGrowComp[]	XRayCrystallographyEntryOperations.get_exptl_crystal_grow_comp_list()
int	XRayCrystallographyEntryOperations.phasing_list_size()
Phasing[]	XRayCrystallographyEntryOperations.get_phasing_list()
int	XRayCrystallographyEntryOperations.phasing_averaging_list_size()
PhasingAveraging[]	XRayCrystallographyEntryOperations.get_phasing_averaging_list()
int	XRayCrystallographyEntryOperations.phasing_isomorphous_list_size()
PhasingIsomorphous[]	XRayCrystallographyEntryOperations.get_phasing_isomorphous_list()
int	XRayCrystallographyEntryOperations.phasing_mad_list_size()
PhasingMad[]	XRayCrystallographyEntryOperations.get_phasing_mad_list()
int	XRayCrystallographyEntryOperations.phasing_mad_clust_list_size()
PhasingMadClust[]	XRayCrystallographyEntryOperations.get_phasing_mad_clust_list()
int	XRayCrystallographyEntryOperations.phasing_mad_expt_list_size()
PhasingMadExpt[]	XRayCrystallographyEntryOperations.get_phasing_mad_expt_list()
int	XRayCrystallographyEntryOperations.phasing_mad_ratio_list_size()
PhasingMadRatio[]	XRayCrystallographyEntryOperations.get_phasing_mad_ratio_list()
int	XRayCrystallographyEntryOperations.phasing_mad_set_list_size()
PhasingMadSet[]	XRayCrystallographyEntryOperations.get_phasing_mad_set_list()
int	XRayCrystallographyEntryOperations.phasing_mir_list_size()
PhasingMir[]	XRayCrystallographyEntryOperations.get_phasing_mir_list()
int	XRayCrystallographyEntryOperations.phasing_mir_der_list_size()
PhasingMirDer[]	XRayCrystallographyEntryOperations.get_phasing_mir_der_list()
int	XRayCrystallographyEntryOperations.phasing_mir_der_refln_list_size()
PhasingMirDerRefln[]	XRayCrystallographyEntryOperations.get_phasing_mir_der_refln_list()
int	XRayCrystallographyEntryOperations.phasing_mir_der_shell_list_size()
PhasingMirDerShell[]	XRayCrystallographyEntryOperations.get_phasing_mir_der_shell_list()
int	XRayCrystallographyEntryOperations.phasing_mir_der_site_list_size()
PhasingMirDerSite[]	XRayCrystallographyEntryOperations.get_phasing_mir_der_site_list()
int	XRayCrystallographyEntryOperations.phasing_mir_shell_list_size()
PhasingMirShell[]	XRayCrystallographyEntryOperations.get_phasing_mir_shell_list()
int	XRayCrystallographyEntryOperations.phasing_set_list_size()
PhasingSet[]	XRayCrystallographyEntryOperations.get_phasing_set_list()
int	XRayCrystallographyEntryOperations.phasing_set_refln_list_size()
PhasingSetRefln[]	XRayCrystallographyEntryOperations.get_phasing_set_refln_list()
int	XRayCrystallographyEntryOperations.refine_list_size()
Refine[]	XRayCrystallographyEntryOperations.get_refine_list()
int	XRayCrystallographyEntryOperations.refine_analyze_list_size()
RefineAnalyze[]	XRayCrystallographyEntryOperations.get_refine_analyze_list()
int	XRayCrystallographyEntryOperations.refine_b_iso_list_size()
RefineBIso[]	XRayCrystallographyEntryOperations.get_refine_b_iso_list()
int	XRayCrystallographyEntryOperations.refine_hist_list_size()
RefineHist[]	XRayCrystallographyEntryOperations.get_refine_hist_list()
int	XRayCrystallographyEntryOperations.refine_ls_restr_list_size()
RefineLsRestr[]	XRayCrystallographyEntryOperations.get_refine_ls_restr_list()
int	XRayCrystallographyEntryOperations.refine_ls_restr_ncs_list_size()
RefineLsRestrNcs[]	XRayCrystallographyEntryOperations.get_refine_ls_restr_ncs_list()
int	XRayCrystallographyEntryOperations.refine_ls_shell_list_size()
RefineLsShell[]	XRayCrystallographyEntryOperations.get_refine_ls_shell_list()
int	XRayCrystallographyEntryOperations.refine_occupancy_list_size()
RefineOccupancy[]	XRayCrystallographyEntryOperations.get_refine_occupancy_list()
int	XRayCrystallographyEntryOperations.pdbx_refine_list_size()
PdbxRefine[]	XRayCrystallographyEntryOperations.get_pdbx_refine_list()
int	XRayCrystallographyEntryOperations.pdbx_xplor_file_list_size()
PdbxXplorFile[]	XRayCrystallographyEntryOperations.get_pdbx_xplor_file_list()
int	XRayCrystallographyEntryOperations.pdbx_refine_aux_file_list_size()
PdbxRefineAuxFile[]	XRayCrystallographyEntryOperations.get_pdbx_refine_aux_file_list()
int	XRayCrystallographyEntryOperations.pdbx_refine_tls_list_size()
PdbxRefineTls[]	XRayCrystallographyEntryOperations.get_pdbx_refine_tls_list()
int	XRayCrystallographyEntryOperations.pdbx_refine_tls_group_list_size()
PdbxRefineTlsGroup[]	XRayCrystallographyEntryOperations.get_pdbx_refine_tls_group_list()
int	XRayCrystallographyEntryOperations.refln_list_size()
Refln[]	XRayCrystallographyEntryOperations.get_refln_list()
int	XRayCrystallographyEntryOperations.reflns_list_size()
Reflns[]	XRayCrystallographyEntryOperations.get_reflns_list()
int	XRayCrystallographyEntryOperations.reflns_scale_list_size()
ReflnsScale[]	XRayCrystallographyEntryOperations.get_reflns_scale_list()
int	XRayCrystallographyEntryOperations.reflns_shell_list_size()
ReflnsShell[]	XRayCrystallographyEntryOperations.get_reflns_shell_list()
int	XRayCrystallographyEntryOperations.symmetry_list_size()
Symmetry[]	XRayCrystallographyEntryOperations.get_symmetry_list()
int	XRayCrystallographyEntryOperations.symmetry_equiv_list_size()
SymmetryEquiv[]	XRayCrystallographyEntryOperations.get_symmetry_equiv_list()

Uses of DataAccessException in org.rcsb.openmms.apps.dbserv

Methods in org.rcsb.openmms.apps.dbserv that throw DataAccessException

Entry	RDBEntryFactoryImpl.get_entry_from_id(java.lang.String id)
protected void	RDBEntryFactoryImpl.checkInit()
java.lang.String[]	RDBEntryFactoryImpl.get_entry_id_list()
int	RDBEntryFactoryImpl.get_entry_id_list_size()
java.lang.String[]	RDBEntryFactoryImpl.get_entry_id_list_block_n(int from, int to)
ModificationDate[]	RDBEntryFactoryImpl.get_entry_modification_dates_block_n(int from, int to)
java.lang.String[]	RDBEntryFactoryImpl.get_entry_group_list()
java.lang.String[]	RDBEntryFactoryImpl.get_entries_in_group(java.lang.String group)
java.lang.String[]	RDBEntryFactoryImpl.native_formats_supported()
byte[]	RDBEntryFactoryImpl.get_native_entry_representation(java.lang.String format, java.lang.String entry_id)
void	DBServ.startCorbaServer(java.lang.String[] args)

Constructors in org.rcsb.openmms.apps.dbserv that throw DataAccessException

RDBEntryFactoryImpl(ServerHandler a, int dbug)

Uses of DataAccessException in org.rcsb.openmms.apps.rdb

Methods in org.rcsb.openmms.apps.rdb that throw DataAccessException

void	DBLoader.processSingleEntry(InsertEntryFinal edbl, java.lang.String ename)
EntryImpl	DBLoader.readSingleEntry(java.lang.String id)
void	DBLoader.deleteSingleEntry(InsertEntryFinal edbl, java.lang.String ename)

Uses of DataAccessException in org.rcsb.openmms.apps.refserv

Methods in org.rcsb.openmms.apps.refserv that throw DataAccessException

Entry	CFileServerImpl.get_entry_from_id(java.lang.String id)
protected void	CFileServerImpl.checkInit()
java.lang.String[]	CFileServerImpl.get_entry_id_list()
int	CFileServerImpl.get_entry_id_list_size()
java.lang.String[]	CFileServerImpl.get_entry_id_list_block_n(int from, int to)
ModificationDate[]	CFileServerImpl.get_entry_modification_dates_block_n(int from, int to)
java.lang.String[]	CFileServerImpl.get_entry_group_list()
java.lang.String[]	CFileServerImpl.get_entries_in_group(java.lang.String group)
java.lang.String[]	CFileServerImpl.native_formats_supported()
byte[]	CFileServerImpl.get_native_entry_representation(java.lang.String format, java.lang.String entry_id)

Constructors in org.rcsb.openmms.apps.refserv that throw DataAccessException

CFileServerImpl(ServerHandler a, int dbug)

Uses of DataAccessException in org.rcsb.openmms.apps.text

Methods in org.rcsb.openmms.apps.text that throw DataAccessException

Entry

TextMMSClient.fetchEntry(java.lang.String id)

Uses of DataAccessException in org.rcsb.openmms.dbinsert

Methods in org.rcsb.openmms.dbinsert that throw DataAccessException

int	SelectCategory.flagToKey(int module, int flag)

Uses of DataAccessException in org.rcsb.openmms.entry

Methods in org.rcsb.openmms.entry that throw DataAccessException

byte[]	XRayCrystallographyEntryImpl.get_presence_flags()
boolean	XRayCrystallographyEntryImpl.initEntry()
java.lang.Object[]	XRayCrystallographyEntryImpl.getList(int sFlag)
int	XRayCrystallographyEntryImpl.getListSize(int sFlag)
java.lang.Object[]	XRayCrystallographyEntryImpl.getListBlock(int sFlag, int from, int to)
boolean	XRayCrystallographyEntryImpl.cacheValue(java.lang.Object[] var, int sFlag)
void	SelectCategoryFinal.readPresenceFlags(EntryImpl ei)
java.lang.Object[]	SelectCategoryFinal.getList(EntryImpl ei, int mod, int flag)
java.lang.Object[]	SelectCategoryFinal.getListBlock(EntryImpl ei, int mod, int flag, int from, int to)
int	SelectCategoryFinal.getListSize(EntryImpl ei, int mod, int flag)
protected void	RDBEntryFoundry.checkDirectoryInit()
void	RDBEntryFoundry.checkModelAndVersion()
java.lang.Object[]	RDBEntryFoundry.getList(EntryImpl ei, int modType, int sFlag)
int	RDBEntryFoundry.getListSize(EntryImpl ei, int modType, int sFlag)
java.lang.Object[]	RDBEntryFoundry.getListBlock(EntryImpl ei, int modType, int sFlag, int from, int to)
EntryImpl	RDBEntryFoundry.createEntryImpl(java.lang.String id)
void	RDBEntryFoundry.readEntryData(EntryImpl ei)
java.lang.String[]	RDBEntryFoundry.getEntryIdList()
ModificationDate[]	RDBEntryFoundry.getEntryModificationDates()
java.lang.String[]	RDBEntryFoundry.getEntryGroupList()
java.lang.String[]	RDBEntryFoundry.getEntriesInGroup(java.lang.String group)
byte[]	RDBEntryFoundry.getNativeEntryRepresentation(java.lang.String format, java.lang.String entry_id)
byte[]	NmrEntryImpl.get_presence_flags()
boolean	NmrEntryImpl.initEntry()
java.lang.Object[]	NmrEntryImpl.getList(int sFlag)
int	NmrEntryImpl.getListSize(int sFlag)
java.lang.Object[]	NmrEntryImpl.getListBlock(int sFlag, int from, int to)
boolean	NmrEntryImpl.cacheValue(java.lang.Object[] var, int sFlag)
byte[]	MmsReferenceEntryImpl.get_presence_flags()
boolean	MmsReferenceEntryImpl.initEntry()
java.lang.Object[]	MmsReferenceEntryImpl.getList(int sFlag)
int	MmsReferenceEntryImpl.getListSize(int sFlag)
java.lang.Object[]	MmsReferenceEntryImpl.getListBlock(int sFlag, int from, int to)
boolean	MmsReferenceEntryImpl.cacheValue(java.lang.Object[] var, int sFlag)
java.lang.Object[]	FileEntryFoundry.getList(EntryImpl ei, int modType, int sFlag)
int	FileEntryFoundry.getListSize(EntryImpl ei, int modType, int sFlag)
java.lang.Object[]	FileEntryFoundry.getListBlock(EntryImpl ei, int modType, int sFlag, int from, int to)
EntryImpl	FileEntryFoundry.createEntryImpl(java.lang.String id)
void	FileEntryFoundry.readEntryData(EntryImpl ei)
java.lang.String	FileEntryFoundry.findDataURL(java.lang.String id)
void	FileEntryFoundry.readEntry(EntryImpl ei)
protected void	FileEntryFoundry.checkDirectoryInit()
java.lang.String[]	FileEntryFoundry.getEntryIdList()
ModificationDate[]	FileEntryFoundry.getEntryModificationDates()
java.lang.String[]	FileEntryFoundry.getEntryGroupList()
java.lang.String[]	FileEntryFoundry.getEntriesInGroup(java.lang.String group)
byte[]	FileEntryFoundry.getNativeEntryRepresentation(java.lang.String format, java.lang.String entry_id)
java.lang.String[]	EntryDirectory.getEntryIdList()
ModificationDate[]	EntryDirectory.getEntryModificationDates()
java.lang.String[]	EntryDirectory.getEntryGroupList()
java.lang.String[]	EntryDirectory.getEntriesInGroup(java.lang.String group)
byte[]	EntryDirectory.getNativeEntryRepresentation(java.lang.String format, java.lang.String entry_id)
EntryImpl	ServerHandler.getEntryFromId(java.lang.String id)
abstract EntryImpl	EntryFoundry.createEntryImpl(java.lang.String id)
abstract void	EntryFoundry.readEntryData(EntryImpl ei)
abstract java.lang.Object[]	EntryFoundry.getList(EntryImpl ei, int modType, int sFlag)
abstract java.lang.Object[]	EntryFoundry.getListBlock(EntryImpl ei, int modType, int sFlag, int from, int to)
abstract int	EntryFoundry.getListSize(EntryImpl ei, int modType, int sFlag)
byte[]	EntryImpl.get_presence_flags()
org.omg.CosPropertyService.Property[]	EntryImpl.get_subentry_list()
boolean	EntryImpl.initEntry() Overide initEntry dummy method in MMSExpr generated EntryMethodImpl superclass Returns true if all variable values have been read when the file was inited.
java.lang.Object[]	EntryImpl.getList(int sFlag)
int	EntryImpl.getListSize(int sFlag)
java.lang.Object[]	EntryImpl.getListBlock(int sFlag, int from, int to)

Constructors in org.rcsb.openmms.entry that throw DataAccessException

RDBEntryFoundry(ServerHandler a, java.sql.Connection cn)

Uses of DataAccessException in org.rcsb.openmms.loader

Methods in org.rcsb.openmms.loader that throw DataAccessException

abstract boolean	MmsReferenceEntryMethodImpl.initEntry()
abstract java.lang.Object[]	MmsReferenceEntryMethodImpl.getList(int sFlag)
abstract int	MmsReferenceEntryMethodImpl.getListSize(int sFlag)
abstract java.lang.Object[]	MmsReferenceEntryMethodImpl.getListBlock(int sFlag, int from, int to)
abstract boolean	MmsReferenceEntryMethodImpl.cacheValue(java.lang.Object[] var, int sFlag)
int	MmsReferenceEntryMethodImpl.citation_list_size()
Citation[]	MmsReferenceEntryMethodImpl.get_citation_list()
int	MmsReferenceEntryMethodImpl.citation_author_list_size()
CitationAuthor[]	MmsReferenceEntryMethodImpl.get_citation_author_list()
int	MmsReferenceEntryMethodImpl.citation_editor_list_size()
CitationEditor[]	MmsReferenceEntryMethodImpl.get_citation_editor_list()
int	MmsReferenceEntryMethodImpl.database_list_size()
Database[]	MmsReferenceEntryMethodImpl.get_database_list()
int	MmsReferenceEntryMethodImpl.database_pdb_caveat_list_size()
DatabasePdbCaveat[]	MmsReferenceEntryMethodImpl.get_database_pdb_caveat_list()
int	MmsReferenceEntryMethodImpl.database_pdb_matrix_list_size()
DatabasePdbMatrix[]	MmsReferenceEntryMethodImpl.get_database_pdb_matrix_list()
int	MmsReferenceEntryMethodImpl.database_pdb_remark_list_size()
DatabasePdbRemark[]	MmsReferenceEntryMethodImpl.get_database_pdb_remark_list()
int	MmsReferenceEntryMethodImpl.database_pdb_rev_list_size()
DatabasePdbRev[]	MmsReferenceEntryMethodImpl.get_database_pdb_rev_list()
int	MmsReferenceEntryMethodImpl.database_pdb_rev_record_list_size()
DatabasePdbRevRecord[]	MmsReferenceEntryMethodImpl.get_database_pdb_rev_record_list()
int	MmsReferenceEntryMethodImpl.database_pdb_tvect_list_size()
DatabasePdbTvect[]	MmsReferenceEntryMethodImpl.get_database_pdb_tvect_list()
int	MmsReferenceEntryMethodImpl.pdbx_database_message_list_size()
PdbxDatabaseMessage[]	MmsReferenceEntryMethodImpl.get_pdbx_database_message_list()
int	MmsReferenceEntryMethodImpl.pdbx_database_pdb_obs_spr_list_size()
PdbxDatabasePdbObsSpr[]	MmsReferenceEntryMethodImpl.get_pdbx_database_pdb_obs_spr_list()
int	MmsReferenceEntryMethodImpl.pdbx_database_proc_list_size()
PdbxDatabaseProc[]	MmsReferenceEntryMethodImpl.get_pdbx_database_proc_list()
int	MmsReferenceEntryMethodImpl.pdbx_database_remark_list_size()
PdbxDatabaseRemark[]	MmsReferenceEntryMethodImpl.get_pdbx_database_remark_list()
int	MmsReferenceEntryMethodImpl.pdbx_database_status_list_size()
PdbxDatabaseStatus[]	MmsReferenceEntryMethodImpl.get_pdbx_database_status_list()
int	MmsReferenceEntryMethodImpl.pdbx_database_related_list_size()
PdbxDatabaseRelated[]	MmsReferenceEntryMethodImpl.get_pdbx_database_related_list()
int	MmsReferenceEntryMethodImpl.computing_list_size()
Computing[]	MmsReferenceEntryMethodImpl.get_computing_list()
int	MmsReferenceEntryMethodImpl.software_list_size()
Software[]	MmsReferenceEntryMethodImpl.get_software_list()
abstract boolean	NmrEntryMethodImpl.initEntry()
abstract java.lang.Object[]	NmrEntryMethodImpl.getList(int sFlag)
abstract int	NmrEntryMethodImpl.getListSize(int sFlag)
abstract java.lang.Object[]	NmrEntryMethodImpl.getListBlock(int sFlag, int from, int to)
abstract boolean	NmrEntryMethodImpl.cacheValue(java.lang.Object[] var, int sFlag)
int	NmrEntryMethodImpl.pdbx_nmr_details_list_size()
org.omg.DsLSRNmr.PdbxNmrDetails[]	NmrEntryMethodImpl.get_pdbx_nmr_details_list()
int	NmrEntryMethodImpl.pdbx_nmr_sample_details_list_size()
org.omg.DsLSRNmr.PdbxNmrSampleDetails[]	NmrEntryMethodImpl.get_pdbx_nmr_sample_details_list()
int	NmrEntryMethodImpl.pdbx_nmr_exptl_sample_list_size()
org.omg.DsLSRNmr.PdbxNmrExptlSample[]	NmrEntryMethodImpl.get_pdbx_nmr_exptl_sample_list()
int	NmrEntryMethodImpl.pdbx_nmr_exptl_sample_conditions_list_size()
org.omg.DsLSRNmr.PdbxNmrExptlSampleConditions[]	NmrEntryMethodImpl.get_pdbx_nmr_exptl_sample_conditions_list()
int	NmrEntryMethodImpl.pdbx_nmr_spectrometer_list_size()
org.omg.DsLSRNmr.PdbxNmrSpectrometer[]	NmrEntryMethodImpl.get_pdbx_nmr_spectrometer_list()
int	NmrEntryMethodImpl.pdbx_nmr_exptl_list_size()
org.omg.DsLSRNmr.PdbxNmrExptl[]	NmrEntryMethodImpl.get_pdbx_nmr_exptl_list()
int	NmrEntryMethodImpl.pdbx_nmr_software_list_size()
org.omg.DsLSRNmr.PdbxNmrSoftware[]	NmrEntryMethodImpl.get_pdbx_nmr_software_list()
int	NmrEntryMethodImpl.pdbx_nmr_constraints_list_size()
org.omg.DsLSRNmr.PdbxNmrConstraints[]	NmrEntryMethodImpl.get_pdbx_nmr_constraints_list()
int	NmrEntryMethodImpl.pdbx_nmr_ensemble_list_size()
org.omg.DsLSRNmr.PdbxNmrEnsemble[]	NmrEntryMethodImpl.get_pdbx_nmr_ensemble_list()
int	NmrEntryMethodImpl.pdbx_nmr_ensemble_rms_list_size()
org.omg.DsLSRNmr.PdbxNmrEnsembleRms[]	NmrEntryMethodImpl.get_pdbx_nmr_ensemble_rms_list()
int	NmrEntryMethodImpl.pdbx_nmr_representative_list_size()
org.omg.DsLSRNmr.PdbxNmrRepresentative[]	NmrEntryMethodImpl.get_pdbx_nmr_representative_list()
int	NmrEntryMethodImpl.pdbx_nmr_refine_list_size()
org.omg.DsLSRNmr.PdbxNmrRefine[]	NmrEntryMethodImpl.get_pdbx_nmr_refine_list()
int	NmrEntryMethodImpl.pdbx_nmr_force_constants_list_size()
org.omg.DsLSRNmr.PdbxNmrForceConstants[]	NmrEntryMethodImpl.get_pdbx_nmr_force_constants_list()
abstract boolean	XRayCrystallographyEntryMethodImpl.initEntry()
abstract java.lang.Object[]	XRayCrystallographyEntryMethodImpl.getList(int sFlag)
abstract int	XRayCrystallographyEntryMethodImpl.getListSize(int sFlag)
abstract java.lang.Object[]	XRayCrystallographyEntryMethodImpl.getListBlock(int sFlag, int from, int to)
abstract boolean	XRayCrystallographyEntryMethodImpl.cacheValue(java.lang.Object[] var, int sFlag)
int	XRayCrystallographyEntryMethodImpl.atom_sites_list_size()
AtomSites[]	XRayCrystallographyEntryMethodImpl.get_atom_sites_list()
int	XRayCrystallographyEntryMethodImpl.atom_sites_alt_list_size()
AtomSitesAlt[]	XRayCrystallographyEntryMethodImpl.get_atom_sites_alt_list()
int	XRayCrystallographyEntryMethodImpl.atom_sites_alt_ens_list_size()
AtomSitesAltEns[]	XRayCrystallographyEntryMethodImpl.get_atom_sites_alt_ens_list()
int	XRayCrystallographyEntryMethodImpl.atom_sites_alt_gen_list_size()
AtomSitesAltGen[]	XRayCrystallographyEntryMethodImpl.get_atom_sites_alt_gen_list()
int	XRayCrystallographyEntryMethodImpl.atom_sites_footnote_list_size()
AtomSitesFootnote[]	XRayCrystallographyEntryMethodImpl.get_atom_sites_footnote_list()
int	XRayCrystallographyEntryMethodImpl.cell_list_size()
Cell[]	XRayCrystallographyEntryMethodImpl.get_cell_list()
int	XRayCrystallographyEntryMethodImpl.cell_measurement_list_size()
CellMeasurement[]	XRayCrystallographyEntryMethodImpl.get_cell_measurement_list()
int	XRayCrystallographyEntryMethodImpl.cell_measurement_refln_list_size()
CellMeasurementRefln[]	XRayCrystallographyEntryMethodImpl.get_cell_measurement_refln_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_list_size()
Diffrn[]	XRayCrystallographyEntryMethodImpl.get_diffrn_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_attenuator_list_size()
DiffrnAttenuator[]	XRayCrystallographyEntryMethodImpl.get_diffrn_attenuator_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_detector_list_size()
DiffrnDetector[]	XRayCrystallographyEntryMethodImpl.get_diffrn_detector_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_measurement_list_size()
DiffrnMeasurement[]	XRayCrystallographyEntryMethodImpl.get_diffrn_measurement_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_orient_matrix_list_size()
DiffrnOrientMatrix[]	XRayCrystallographyEntryMethodImpl.get_diffrn_orient_matrix_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_orient_refln_list_size()
DiffrnOrientRefln[]	XRayCrystallographyEntryMethodImpl.get_diffrn_orient_refln_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_radiation_list_size()
DiffrnRadiation[]	XRayCrystallographyEntryMethodImpl.get_diffrn_radiation_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_radiation_wavelength_list_size()
DiffrnRadiationWavelength[]	XRayCrystallographyEntryMethodImpl.get_diffrn_radiation_wavelength_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_refln_list_size()
DiffrnRefln[]	XRayCrystallographyEntryMethodImpl.get_diffrn_refln_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_reflns_list_size()
DiffrnReflns[]	XRayCrystallographyEntryMethodImpl.get_diffrn_reflns_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_scale_group_list_size()
DiffrnScaleGroup[]	XRayCrystallographyEntryMethodImpl.get_diffrn_scale_group_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_source_list_size()
DiffrnSource[]	XRayCrystallographyEntryMethodImpl.get_diffrn_source_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_standard_refln_list_size()
DiffrnStandardRefln[]	XRayCrystallographyEntryMethodImpl.get_diffrn_standard_refln_list()
int	XRayCrystallographyEntryMethodImpl.diffrn_standards_list_size()
DiffrnStandards[]	XRayCrystallographyEntryMethodImpl.get_diffrn_standards_list()
int	XRayCrystallographyEntryMethodImpl.exptl_list_size()
Exptl[]	XRayCrystallographyEntryMethodImpl.get_exptl_list()
int	XRayCrystallographyEntryMethodImpl.exptl_crystal_list_size()
ExptlCrystal[]	XRayCrystallographyEntryMethodImpl.get_exptl_crystal_list()
int	XRayCrystallographyEntryMethodImpl.exptl_crystal_face_list_size()
ExptlCrystalFace[]	XRayCrystallographyEntryMethodImpl.get_exptl_crystal_face_list()
int	XRayCrystallographyEntryMethodImpl.exptl_crystal_grow_list_size()
ExptlCrystalGrow[]	XRayCrystallographyEntryMethodImpl.get_exptl_crystal_grow_list()
int	XRayCrystallographyEntryMethodImpl.exptl_crystal_grow_comp_list_size()
ExptlCrystalGrowComp[]	XRayCrystallographyEntryMethodImpl.get_exptl_crystal_grow_comp_list()
int	XRayCrystallographyEntryMethodImpl.phasing_list_size()
Phasing[]	XRayCrystallographyEntryMethodImpl.get_phasing_list()
int	XRayCrystallographyEntryMethodImpl.phasing_averaging_list_size()
PhasingAveraging[]	XRayCrystallographyEntryMethodImpl.get_phasing_averaging_list()
int	XRayCrystallographyEntryMethodImpl.phasing_isomorphous_list_size()
PhasingIsomorphous[]	XRayCrystallographyEntryMethodImpl.get_phasing_isomorphous_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mad_list_size()
PhasingMad[]	XRayCrystallographyEntryMethodImpl.get_phasing_mad_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mad_clust_list_size()
PhasingMadClust[]	XRayCrystallographyEntryMethodImpl.get_phasing_mad_clust_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mad_expt_list_size()
PhasingMadExpt[]	XRayCrystallographyEntryMethodImpl.get_phasing_mad_expt_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mad_ratio_list_size()
PhasingMadRatio[]	XRayCrystallographyEntryMethodImpl.get_phasing_mad_ratio_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mad_set_list_size()
PhasingMadSet[]	XRayCrystallographyEntryMethodImpl.get_phasing_mad_set_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mir_list_size()
PhasingMir[]	XRayCrystallographyEntryMethodImpl.get_phasing_mir_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mir_der_list_size()
PhasingMirDer[]	XRayCrystallographyEntryMethodImpl.get_phasing_mir_der_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mir_der_refln_list_size()
PhasingMirDerRefln[]	XRayCrystallographyEntryMethodImpl.get_phasing_mir_der_refln_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mir_der_shell_list_size()
PhasingMirDerShell[]	XRayCrystallographyEntryMethodImpl.get_phasing_mir_der_shell_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mir_der_site_list_size()
PhasingMirDerSite[]	XRayCrystallographyEntryMethodImpl.get_phasing_mir_der_site_list()
int	XRayCrystallographyEntryMethodImpl.phasing_mir_shell_list_size()
PhasingMirShell[]	XRayCrystallographyEntryMethodImpl.get_phasing_mir_shell_list()
int	XRayCrystallographyEntryMethodImpl.phasing_set_list_size()
PhasingSet[]	XRayCrystallographyEntryMethodImpl.get_phasing_set_list()
int	XRayCrystallographyEntryMethodImpl.phasing_set_refln_list_size()
PhasingSetRefln[]	XRayCrystallographyEntryMethodImpl.get_phasing_set_refln_list()
int	XRayCrystallographyEntryMethodImpl.refine_list_size()
Refine[]	XRayCrystallographyEntryMethodImpl.get_refine_list()
int	XRayCrystallographyEntryMethodImpl.refine_analyze_list_size()
RefineAnalyze[]	XRayCrystallographyEntryMethodImpl.get_refine_analyze_list()
int	XRayCrystallographyEntryMethodImpl.refine_b_iso_list_size()
RefineBIso[]	XRayCrystallographyEntryMethodImpl.get_refine_b_iso_list()
int	XRayCrystallographyEntryMethodImpl.refine_hist_list_size()
RefineHist[]	XRayCrystallographyEntryMethodImpl.get_refine_hist_list()
int	XRayCrystallographyEntryMethodImpl.refine_ls_restr_list_size()
RefineLsRestr[]	XRayCrystallographyEntryMethodImpl.get_refine_ls_restr_list()
int	XRayCrystallographyEntryMethodImpl.refine_ls_restr_ncs_list_size()
RefineLsRestrNcs[]	XRayCrystallographyEntryMethodImpl.get_refine_ls_restr_ncs_list()
int	XRayCrystallographyEntryMethodImpl.refine_ls_shell_list_size()
RefineLsShell[]	XRayCrystallographyEntryMethodImpl.get_refine_ls_shell_list()
int	XRayCrystallographyEntryMethodImpl.refine_occupancy_list_size()
RefineOccupancy[]	XRayCrystallographyEntryMethodImpl.get_refine_occupancy_list()
int	XRayCrystallographyEntryMethodImpl.pdbx_refine_list_size()
PdbxRefine[]	XRayCrystallographyEntryMethodImpl.get_pdbx_refine_list()
int	XRayCrystallographyEntryMethodImpl.pdbx_xplor_file_list_size()
PdbxXplorFile[]	XRayCrystallographyEntryMethodImpl.get_pdbx_xplor_file_list()
int	XRayCrystallographyEntryMethodImpl.pdbx_refine_aux_file_list_size()
PdbxRefineAuxFile[]	XRayCrystallographyEntryMethodImpl.get_pdbx_refine_aux_file_list()
int	XRayCrystallographyEntryMethodImpl.pdbx_refine_tls_list_size()
PdbxRefineTls[]	XRayCrystallographyEntryMethodImpl.get_pdbx_refine_tls_list()
int	XRayCrystallographyEntryMethodImpl.pdbx_refine_tls_group_list_size()
PdbxRefineTlsGroup[]	XRayCrystallographyEntryMethodImpl.get_pdbx_refine_tls_group_list()
int	XRayCrystallographyEntryMethodImpl.refln_list_size()
Refln[]	XRayCrystallographyEntryMethodImpl.get_refln_list()
int	XRayCrystallographyEntryMethodImpl.reflns_list_size()
Reflns[]	XRayCrystallographyEntryMethodImpl.get_reflns_list()
int	XRayCrystallographyEntryMethodImpl.reflns_scale_list_size()
ReflnsScale[]	XRayCrystallographyEntryMethodImpl.get_reflns_scale_list()
int	XRayCrystallographyEntryMethodImpl.reflns_shell_list_size()
ReflnsShell[]	XRayCrystallographyEntryMethodImpl.get_reflns_shell_list()
int	XRayCrystallographyEntryMethodImpl.symmetry_list_size()
Symmetry[]	XRayCrystallographyEntryMethodImpl.get_symmetry_list()
int	XRayCrystallographyEntryMethodImpl.symmetry_equiv_list_size()
SymmetryEquiv[]	XRayCrystallographyEntryMethodImpl.get_symmetry_equiv_list()
abstract boolean	EntryMethodImpl.initEntry()
abstract java.lang.Object[]	EntryMethodImpl.getList(int sFlag)
abstract int	EntryMethodImpl.getListSize(int sFlag)
abstract java.lang.Object[]	EntryMethodImpl.getListBlock(int sFlag, int from, int to)
abstract boolean	EntryMethodImpl.cacheValue(java.lang.Object[] var, int sFlag)
int	EntryMethodImpl.atom_site_list_size()
AtomSite[]	EntryMethodImpl.get_atom_site_list()
AtomSite[]	EntryMethodImpl.get_atom_site_block_n(int from, int to)
int	EntryMethodImpl.atom_site_ext_list_size()
AtomSiteExt[]	EntryMethodImpl.get_atom_site_ext_list()
AtomSiteExt[]	EntryMethodImpl.get_atom_site_ext_block_n(int from, int to)
int	EntryMethodImpl.atom_site_anisotrop_list_size()
AtomSiteAnisotrop[]	EntryMethodImpl.get_atom_site_anisotrop_list()
int	EntryMethodImpl.atom_type_list_size()
AtomType[]	EntryMethodImpl.get_atom_type_list()
int	EntryMethodImpl.chem_comp_list_size()
ChemComp[]	EntryMethodImpl.get_chem_comp_list()
int	EntryMethodImpl.chem_comp_angle_list_size()
ChemCompAngle[]	EntryMethodImpl.get_chem_comp_angle_list()
int	EntryMethodImpl.chem_comp_atom_list_size()
ChemCompAtom[]	EntryMethodImpl.get_chem_comp_atom_list()
int	EntryMethodImpl.chem_comp_bond_list_size()
ChemCompBond[]	EntryMethodImpl.get_chem_comp_bond_list()
int	EntryMethodImpl.chem_comp_chir_list_size()
ChemCompChir[]	EntryMethodImpl.get_chem_comp_chir_list()
int	EntryMethodImpl.chem_comp_chir_atom_list_size()
ChemCompChirAtom[]	EntryMethodImpl.get_chem_comp_chir_atom_list()
int	EntryMethodImpl.chem_comp_link_list_size()
ChemCompLink[]	EntryMethodImpl.get_chem_comp_link_list()
int	EntryMethodImpl.chem_comp_plane_list_size()
ChemCompPlane[]	EntryMethodImpl.get_chem_comp_plane_list()
int	EntryMethodImpl.chem_comp_plane_atom_list_size()
ChemCompPlaneAtom[]	EntryMethodImpl.get_chem_comp_plane_atom_list()
int	EntryMethodImpl.chem_comp_tor_list_size()
ChemCompTor[]	EntryMethodImpl.get_chem_comp_tor_list()
int	EntryMethodImpl.chem_comp_tor_value_list_size()
ChemCompTorValue[]	EntryMethodImpl.get_chem_comp_tor_value_list()
int	EntryMethodImpl.chem_link_list_size()
ChemLink[]	EntryMethodImpl.get_chem_link_list()
int	EntryMethodImpl.chem_link_angle_list_size()
ChemLinkAngle[]	EntryMethodImpl.get_chem_link_angle_list()
int	EntryMethodImpl.chem_link_bond_list_size()
ChemLinkBond[]	EntryMethodImpl.get_chem_link_bond_list()
int	EntryMethodImpl.chem_link_chir_list_size()
ChemLinkChir[]	EntryMethodImpl.get_chem_link_chir_list()
int	EntryMethodImpl.chem_link_chir_atom_list_size()
ChemLinkChirAtom[]	EntryMethodImpl.get_chem_link_chir_atom_list()
int	EntryMethodImpl.chem_link_plane_list_size()
ChemLinkPlane[]	EntryMethodImpl.get_chem_link_plane_list()
int	EntryMethodImpl.chem_link_plane_atom_list_size()
ChemLinkPlaneAtom[]	EntryMethodImpl.get_chem_link_plane_atom_list()
int	EntryMethodImpl.chem_link_tor_list_size()
ChemLinkTor[]	EntryMethodImpl.get_chem_link_tor_list()
int	EntryMethodImpl.chem_link_tor_value_list_size()
ChemLinkTorValue[]	EntryMethodImpl.get_chem_link_tor_value_list()
int	EntryMethodImpl.entity_list_size()
Entity[]	EntryMethodImpl.get_entity_list()
int	EntryMethodImpl.entity_keywords_list_size()
EntityKeywords[]	EntryMethodImpl.get_entity_keywords_list()
int	EntryMethodImpl.entity_link_list_size()
EntityLink[]	EntryMethodImpl.get_entity_link_list()
int	EntryMethodImpl.entity_name_com_list_size()
EntityNameCom[]	EntryMethodImpl.get_entity_name_com_list()
int	EntryMethodImpl.entity_name_sys_list_size()
EntityNameSys[]	EntryMethodImpl.get_entity_name_sys_list()
int	EntryMethodImpl.entity_poly_list_size()
EntityPoly[]	EntryMethodImpl.get_entity_poly_list()
int	EntryMethodImpl.entity_poly_seq_list_size()
EntityPolySeq[]	EntryMethodImpl.get_entity_poly_seq_list()
EntityPolySeq[]	EntryMethodImpl.get_entity_poly_seq_block_n(int from, int to)
int	EntryMethodImpl.entity_src_gen_list_size()
EntitySrcGen[]	EntryMethodImpl.get_entity_src_gen_list()
int	EntryMethodImpl.entity_src_nat_list_size()
EntitySrcNat[]	EntryMethodImpl.get_entity_src_nat_list()
int	EntryMethodImpl.pdbx_entity_name_list_size()
PdbxEntityName[]	EntryMethodImpl.get_pdbx_entity_name_list()
int	EntryMethodImpl.pdbx_prerelease_seq_list_size()
PdbxPrereleaseSeq[]	EntryMethodImpl.get_pdbx_prerelease_seq_list()
int	EntryMethodImpl.pdbx_poly_seq_scheme_list_size()
PdbxPolySeqScheme[]	EntryMethodImpl.get_pdbx_poly_seq_scheme_list()
int	EntryMethodImpl.pdbx_nonpoly_scheme_list_size()
PdbxNonpolyScheme[]	EntryMethodImpl.get_pdbx_nonpoly_scheme_list()
int	EntryMethodImpl.pdbx_entity_assembly_list_size()
PdbxEntityAssembly[]	EntryMethodImpl.get_pdbx_entity_assembly_list()
int	EntryMethodImpl.pdbx_entity_src_syn_list_size()
PdbxEntitySrcSyn[]	EntryMethodImpl.get_pdbx_entity_src_syn_list()
int	EntryMethodImpl.entry_link_list_size()
EntryLink[]	EntryMethodImpl.get_entry_link_list()
int	EntryMethodImpl.geom_list_size()
Geom[]	EntryMethodImpl.get_geom_list()
int	EntryMethodImpl.geom_angle_list_size()
GeomAngle[]	EntryMethodImpl.get_geom_angle_list()
int	EntryMethodImpl.geom_bond_list_size()
GeomBond[]	EntryMethodImpl.get_geom_bond_list()
int	EntryMethodImpl.geom_contact_list_size()
GeomContact[]	EntryMethodImpl.get_geom_contact_list()
int	EntryMethodImpl.geom_hbond_list_size()
GeomHbond[]	EntryMethodImpl.get_geom_hbond_list()
int	EntryMethodImpl.geom_torsion_list_size()
GeomTorsion[]	EntryMethodImpl.get_geom_torsion_list()
int	EntryMethodImpl.structure_list_size()
Structure[]	EntryMethodImpl.get_structure_list()
int	EntryMethodImpl.struct_asym_list_size()
StructAsym[]	EntryMethodImpl.get_struct_asym_list()
int	EntryMethodImpl.struct_biol_list_size()
StructBiol[]	EntryMethodImpl.get_struct_biol_list()
int	EntryMethodImpl.struct_biol_gen_list_size()
StructBiolGen[]	EntryMethodImpl.get_struct_biol_gen_list()
int	EntryMethodImpl.struct_biol_keywords_list_size()
StructBiolKeywords[]	EntryMethodImpl.get_struct_biol_keywords_list()
int	EntryMethodImpl.struct_biol_view_list_size()
StructBiolView[]	EntryMethodImpl.get_struct_biol_view_list()
int	EntryMethodImpl.struct_conf_list_size()
StructConf[]	EntryMethodImpl.get_struct_conf_list()
int	EntryMethodImpl.struct_conf_type_list_size()
StructConfType[]	EntryMethodImpl.get_struct_conf_type_list()
int	EntryMethodImpl.struct_conn_list_size()
StructConn[]	EntryMethodImpl.get_struct_conn_list()
int	EntryMethodImpl.struct_conn_type_list_size()
StructConnType[]	EntryMethodImpl.get_struct_conn_type_list()
int	EntryMethodImpl.struct_keywords_list_size()
StructKeywords[]	EntryMethodImpl.get_struct_keywords_list()
int	EntryMethodImpl.struct_mon_details_list_size()
StructMonDetails[]	EntryMethodImpl.get_struct_mon_details_list()
int	EntryMethodImpl.struct_mon_nucl_list_size()
StructMonNucl[]	EntryMethodImpl.get_struct_mon_nucl_list()
int	EntryMethodImpl.struct_mon_prot_list_size()
StructMonProt[]	EntryMethodImpl.get_struct_mon_prot_list()
int	EntryMethodImpl.struct_mon_prot_cis_list_size()
StructMonProtCis[]	EntryMethodImpl.get_struct_mon_prot_cis_list()
int	EntryMethodImpl.struct_ncs_dom_list_size()
StructNcsDom[]	EntryMethodImpl.get_struct_ncs_dom_list()
int	EntryMethodImpl.struct_ncs_dom_lim_list_size()
StructNcsDomLim[]	EntryMethodImpl.get_struct_ncs_dom_lim_list()
int	EntryMethodImpl.struct_ncs_ens_list_size()
StructNcsEns[]	EntryMethodImpl.get_struct_ncs_ens_list()
int	EntryMethodImpl.struct_ncs_ens_gen_list_size()
StructNcsEnsGen[]	EntryMethodImpl.get_struct_ncs_ens_gen_list()
int	EntryMethodImpl.struct_ncs_oper_list_size()
StructNcsOper[]	EntryMethodImpl.get_struct_ncs_oper_list()
int	EntryMethodImpl.struct_ref_list_size()
StructRef[]	EntryMethodImpl.get_struct_ref_list()
int	EntryMethodImpl.struct_ref_seq_list_size()
StructRefSeq[]	EntryMethodImpl.get_struct_ref_seq_list()
int	EntryMethodImpl.struct_ref_seq_dif_list_size()
StructRefSeqDif[]	EntryMethodImpl.get_struct_ref_seq_dif_list()
int	EntryMethodImpl.struct_sheet_list_size()
StructSheet[]	EntryMethodImpl.get_struct_sheet_list()
int	EntryMethodImpl.struct_sheet_hbond_list_size()
StructSheetHbond[]	EntryMethodImpl.get_struct_sheet_hbond_list()
int	EntryMethodImpl.pdbx_struct_sheet_hbond_list_size()
PdbxStructSheetHbond[]	EntryMethodImpl.get_pdbx_struct_sheet_hbond_list()
int	EntryMethodImpl.struct_sheet_order_list_size()
StructSheetOrder[]	EntryMethodImpl.get_struct_sheet_order_list()
int	EntryMethodImpl.struct_sheet_range_list_size()
StructSheetRange[]	EntryMethodImpl.get_struct_sheet_range_list()
int	EntryMethodImpl.struct_sheet_topology_list_size()
StructSheetTopology[]	EntryMethodImpl.get_struct_sheet_topology_list()
int	EntryMethodImpl.struct_site_list_size()
StructSite[]	EntryMethodImpl.get_struct_site_list()
int	EntryMethodImpl.struct_site_gen_list_size()
StructSiteGen[]	EntryMethodImpl.get_struct_site_gen_list()
int	EntryMethodImpl.struct_site_keywords_list_size()
StructSiteKeywords[]	EntryMethodImpl.get_struct_site_keywords_list()
int	EntryMethodImpl.struct_site_view_list_size()
StructSiteView[]	EntryMethodImpl.get_struct_site_view_list()