Topics
Computing
School on Charge Density and MoPro
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In Mexico City
1. Benoît Guillot, Universite de Lorraine, France
2. Christian Jelsch, Universite de Lorraine, France
Shanghai International Crystallographic School Working with Bilbao Crystallographic Server
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In Shanghai
Shanghai International Crystallographic School
working with Bilbao Crystallographic Server
http://www.cryst.ehu.es
The aim of the school is to provide an introduction to group theoretical methods and tools necessary for appropriate applications of symmetry properties in solid state material science. Special emphasis is given to tutorials on computational crystallography using the Bilbao Crystallographic Server (BCS) (www.cryst.ehu.es) for the study of specific problems in solid state physics, like phase transitions, and their symmetry-mode analysis, comparison between crystal structures, magnetic symmetry and its applications in the description of magnetic structures, etc. The applications of BCS tools to ab initio calculations is specifically discussed for the study of ferroelectric polarization in organic and inorganic crystalline structures, phonon properties and computational materials design by structure prediction.
The school is intended for scientists in Material Science, Solid State Physics and Crystallography in general and specifically for graduate students and young researchers interested in a deep and practical knowledge of group theory and crystallography as applied in material science. The maximum number of participant is limited to 70. Official language of the School is English. Location: The school will take place LeHu Hotel in Shanghai University (Baoshan Campus) http://www.lhljt.shu.edu.cn
RapiData 2017 at SSRL
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In Stanford, CA
Data Collection and Structure Solving: A Practical Course in Macromolecular X-ray Diffraction Measurement
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The aim of the RapiData course is to educate and train young scientists in data collection and processing methods at synchrotron beamlines, using state-of-the-art software and instrumentation
The course will comprise hands-on experiments at the SSRL beamlines, software tutorials, and lectures on the following topics:
- Specimen preparation, tactics in data collection
- X-ray light sources
- X-ray detectors
- Data reduction
- Structure solving by MAD, SAD and Molecular replacement
- Complementary methods (spectroscopy and small angle scattering)
Advanced WorkÂshop on Cryo-Electron TomogÂraÂphy
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In Vienna
May 6â€"7, 2017: Optional Pre-Course
May 8â€"12, 2017: WorkÂshop
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ConÂtent Pre-Course
(Optional for expeÂriÂenced parÂticÂiÂpants)
- IntroÂducÂtion to elecÂtron tomogÂraÂphy and SeriÂalEM
- Linux
- Data proÂcessÂing with IMOD and eTomo
ConÂtent WorkÂshop
- ImmerÂsion freezÂing for cryo-electron tomogÂraÂphy
- High presÂsure freezÂing and CEMOÂVIS
- Cryo-CLEM
- Low-dose data colÂlecÂtion with SeriÂalEM
- Direct elecÂtron detecÂtors
- Cryo-STEM tomogÂraÂphy
- ProÂcessÂing of low-dose tilt series with IMOD
- ModÂelÂling and interÂpreÂtaÂtion of cryo-electron tomogÂraÂphy data
- SubtoÂmoÂgram averÂagÂing with PEET
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ICTMS 2017: 3rd International Conference on Tomography of Materials and Structures
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In Lund
This biannual conference of IntACT (International Association of Computed Tomography) will focus on the use of 3D tomographic methods for (non-clinical) studies of the internal structures of materials and their evolution.
ICTMS 2017 will bring together an international group of scientists, from universities, research organisations and industry, to discuss a broad range of issues related to 3D/4D tomographic imaging of materials and structures.
The call for abstracts will remain open until 28 January 2017.
The main focus of this conference will be recent advances in the following areas:
- Tomography acquisition hardware, software and associated experimental set-ups.
- In situ and in-operandi experiments
- "Standard" and novel modalities of tomographic imaging for material analysis (using diffraction, refraction, absorption... of X-rays, neutrons, electrons...)
- Tomographic reconstruction techniques
- 3D and 4D image analysis to extract pertinent information on internal structures and their evolution
- Case studies including applications to further the understanding of materials, structures and processes.
SPring-8/CCP4 Workshop and Computational Crystallography School
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In Hyogo (SPring-8)
From data processing to structure refinement and beyond
The workshop will cover the structure solution process, consisting of lectures, tutorials and problem solving sessions. Lectures include Garib Murshudov on refinement, Phil Evans on scaling using aimless and James Parkhurst from the DIALS team. The deadline for application is the 10th of December.
International Collaboration on Advanced Neutron Sources (ICANS XXII) Meeting
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In Oxford
The 22nd meeting of the International Collaboration on Advanced Neutron Sources (ICANS XXII) will be held on the 27th -31st March 2017 in Oxford, England.
For more details, visit: Â http://icansxxii.iopconfs.org/home
 The abstract submission deadline is 30 November 2016.  ICANS is an informal network of laboratories whose scientists and engineers are involved in developing pulsed neutron sources and accelerator based spallation neutron sources.  The collaboration was founded in 1977 as a forum to promote discussions and collaborative work, and to share information on three main topics: accelerators, targets and moderators, and instruments.  After 24 years, the meeting returns to the UK and will be hosted by the ISIS Neutron and Muon Source at the Said Business School, University of Oxford with accommodation at St Anne’s College.  In addition to the core areas of accelerators, target and instrumentation, other key areas such as sample environment, data analysis and computing, polarisation, detectors, shielding and neutronics will be discussed.  It is the principal goal of ICANS to promote and facilitate informal discussions and, as such, the meeting will comprise several workshop sessions.   Key dates: Abstract submission deadline: 30 November 2016 Early registration deadline: 31 January 2017 Registration deadline: 17 March 2017 Paper submission deadline: 27 March 2017
SPIDER & Scipion Workshop: Image-processing of electron micrographs
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In Munich
Workshop on cryo-EM and single-particle analysis
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In Melbourne
This workshop precedes the Lorne Proteins meeting.
The workshop will include hands-on practicals in addition toproblem-solving-oriented talks from leading software developers in the field, including
- Steven Ludtke, lead developer of the popular, all-purpose EMAN2 suite of programs
- Hans Elmlund, lead developer of the SIMPLE/PRIME suite of programs for ab initio 3Dreconstruction
- Jose Miguel de la Rosa Trevin and Roberto Marabini, developers of the integrative software tool Scipion
The workshop will cover all computational aspects of single-particleanalysis, including 2D analysis, 3D starting model generation,heterogeneity analysis, and high-resolution refinement. You will beintroduced to and get the opportunity to try out the latest developments inthe field.
The meeting will accept 40 students.
CCP4 Study Weekend
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In Nottingham
From Crystal to Structure
 Sessions will cover:
- Getting the data
- Is there a homologue?
- No model - back to experiments
- Refining and building
- Did you get it right?
- Going forwards
Price: £235
Fee Info: The registration fee covers refreshments, lunch and conference dinner. Early bird registration starts on 5th September and ends on 20 November 2016. After this date registration goes up to £285. Registration will close on 12 December 2016 (or earlier if places sell out).
NOBUGS (New Opportunities for Better User Group Software) Conference
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In Copenhagen
The NOBUGS (New Opportunities for Better User Group Software) Conference Series has the aim to foster collaboration and exchange between scientists and IT professionals working on software for X-ray, neutron and muon sources around the world. NOBUGS 2016 is organised by the European Spallation Source, University of Copenhagen and MAX IV Laboratory
CCP-EM Leeds RELION Workshop
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In Leeds
Hosted by CCP-EM and the Astbury Biostructure Laboratory (University of Leeds, UK) this one day workshop will focus on the RELION software package and is led by its developer Sjors Scheres (MRC-LMB).
The training will involve a hands-on tutorial of RELION 2.0 for cryo-EM single-particle analysis (http://www2.mrc-lmb.cam.ac.uk/relion). It will cover the entire process from initial micrograph inspection, CTF estimation, (automated) particle picking, 2D and 3D classification, 3D high-resolution refinement, movie-processing, and map sharpening.
Computational facilities will be provided along with refreshments.
Registration is free but not a guarantee of acceptance. Application for registration will close on Monday 15th August 2016, participants will be selected and we will confirm places no later than Friday 19th August 2016. There are 30 places at the workshop.
Joint International Conference of the Hellenic Crystallographic Association and the Hellenic Society for Computational Biology and Bioinformatics - HeCrA-HSCBB16
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In Athens
The 8th International Conference of the Hellenic Crystallographic Association (HeCrA) and the 11th Conference of the Hellenic Society for Computational Biology and Bioinformatics (HSCBB) are jointly organized as HeCrA-HSCBB16.Â
HeCrA-HSCBB16 will take place at the Agricultural University of Athens in October 7-9, 2016.Â
The conference will address key questions and issues in molecular structure and interactions. The Conference is the major event both of HeCrA & HSCBB. It is a forum to communicate state-of-the-art research, interact and establish scientific networks and collaborations.
In particular, it will bring together crystallographers with Bioinformaticians and Computational Biologists for the identification of macromolecular targets and small molecules of pharmaceutical and biotechnological interest and study their interactions.
There will be oral and poster presentations in addition to talks from distinguished invited speakers from Greece and the European Union.Â
Organisers: Hellenic Crystallographic Association & Hellenic Society for Computational Biology and Bioinformatics.
Methods in Crystallographic Computing: ECACOMSIG Computing Workshop
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In Freudenstadt, Black Forest
ECACOMSIG brings together software developers from across all
disciplines of crystallography to meet in an informal and productive
Setting for networking, exchange of ideas and to learn new skills. This
year's school blurs the border between lecturers and attendants: all
participants are invited to offer tutorials. Among them will be George
Sheldrick, developer of SHELX, who offer a tutorial on parallel
computing; Rita Giordano, who will teach on using statistics for for
automatic data evaluation and Jens Luebbe, who will show his brand-new
Laue Script, a visual programming language for small molecule
crystallography.
The Workshop will be held in Freudenstadt in the Black Forest from 25-28
August - attendance is not dependent on registration for ECM30, but a
bus transfer to Basel is included in the registration fee of 165€/190€
(double/single room). The registration includes 3 nights accommodation,
all meals during the workshop and refreshments as well.
MX beamline training session
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In Diamond Light Source, Didcot
Organized by the Diamond Light Source Macromolecular Crystallography group.
The aim is to provide MX users with sufficient training to be able to operate any of the Diamond MX beamlines efficiently and to get the most benefit from their beam-time. The training will involve hands-on sessions on the suite of five operational MX beamlines (http://www.diamond.ac.uk/mx-home/) as well as optional offline software sessions.
20th July afternoon optional session "Hands on software":
- CCP4
- DIALS
21st July, MX beamlines and data room sessions:
- MX software: automation in data analysis
- Mini-Kappa goniometry / Anomalous data collection
- Introduction to VMX-i
- I24 new end station/ In-situ diffraction
- Fragment screening â€" I04-1/Lab36
- Experiment database: new ISPyB
Registration is free-of-charge with lunch provided on the 20th and 21st July, and accommodation and dinner for the night of July 20th.
l'école thématique "Modélisation et Dynamique Moléculaire (MoDyn - 2016)
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In Montpellier
Les grandes lignes du programme sont:
Analyse des séquences pour la modélisation 3D (bases de données Pfam, UniProt,...) Énergie libre, entropie et perturbation (FEP) Modélisation moléculaire par homologie et Ab initio (Modeller, Robetta,...) Conception de molécules pour le Drug Design (Chimiothèques, PubChem,...) Docking / Scoring et criblage virtuel de chimiothèques (AutoDock Vina,...) Simulations de dynamique moléculaire, QM/MM et modes normaux (Amber, Gromacs, NAMD,...) Visualisation 3D et dynamique interactive (VMD, PyMol, Chimera, UnityMol,...)
Toutes les informations disponibles sur le site: https://modyn.sciencesconf.org/
ATTENTION, le nombre de place est limité - Date limite de dépôt des candidatures: 30 juin 2016 Contact: [email protected]
4th Annual CCP-SAS Project Meeting
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In Gaithersburg, MD
Subtomogram Averaging with Dynamo
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In Basel
Fifth Dynamo workshop
The workshop will provide hands-on training on all practical aspects of sub-tomogram averaging, encompassing all stages of the pipeline: tomogram visualization and archiving, particle picking in different geometries, averaging, refinement and classification. No previous experience is required. Computing infrastructure will be provided in place and participants are welcome to bring their own data sets.
BCA/CCP4 Summer School in Protein Crystallography
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In Diamond Light Source, Didcot
We recognise that an active social programme plays a role in enabling students to make links that may be maintained throughout a research career. There will be a conference dinner, and a number of other events, including a boat trip on the Thames from Oxford.
SMARTER 5. Fifth Structure elucidation by combining Magnetic Resonance, Computational Modelling and Diffraction
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In Bayreuth