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Re: [Imgcif-l] CBFlib_0.7.7 update to subrelease 0.7.7.4

Dear Jon,

   Thank you.  This is very helpful, and it is a good idea to send it
to the list to save others from having to report the same problems.
Since windows is a very odd case, I think I'll make a distinct
Makefile_MINGW, rather than use a make.inc  I'll wait a couple of
days for other trouble reports and put out an update with your
changes early next week.

   Regards,
     Herbert

At 6:29 PM +0200 5/7/07, Jon Wright wrote:
>Dear Herbert,
>
>Here are some notes for compiling with the mingw system on windows. 
>It is a free gnu c compiler with "msys" bash shell.  For f90 I used 
>the g95 compiler ( www.g95.org ).
>
>g95 is fussy about the inline binary constants. A diff of 
>fcb_read_bits.m4 should be attached - it could easily contain errors 
>as I don't really know the intentions of the code. I have just used 
>the transfer intrinsic to give a matching type to use in IAND.
>
>libmap.a is required for target 'all' in the Makefiles but my 'make' 
>doesn't see how to make it. I've attached an edited makefile for 
>this compiler / platform. There are some issues with "time" not 
>existing and, no directories /usr/bin etc. Might be worthwhile to 
>have a Makefile and then a platform dependent make.inc ? I had to 
>change in lots of places.
>
>My favourite windows C compiler (mingw gcc) didn't know about bzero: 
>needed to add something near the top of cbf_codes.c:
>
>#ifdef __MINGW32__
>#define bzero(ptr,size) memset (ptr, 0, size);
>#endif
>
>
>The needed to remove the -ansi flag from the makefile as "swab" 
>function is otherwise hidden by an ifdef in <string.h>.
>  src/cbf_uncompressed.c:431: warning: implicit declaration of function `swab'
>
>mkstemp is missing on mingw32 also (in img2cif.c etc), I have 
>attached a header file implementation, but I am not sure if it 
>works. If this is in the example directory then add this to 
>img2cif.c, cif2cbf.c and convert_minicbf.c:
>
>#ifdef __MINGW32__
>#include "mkstemp.h"
>#endif
>
>It might be better to use tmpfile(?). /tmp exists on my system, but 
>is extremely unlikely to be there in general. This change allows the 
>programs to compile, but not pass the tests. It seems windows (mingw 
>MSYS bash shell) does like reading or writing binary images through 
>stdin or stdout. I changed the makefile to use filenames for the 
>images. This means the mkstemp supplied may be no good. It might be 
>better to force stdin and stdout to be binary streams in this case, 
>as in 
>(http://archives.postgresql.org/pgsql-hackers-win32/2005-01/msg00227.php)
>
>I can investigate further if you think it is likely that windows 
>users will need this functionality.
>
>Since "time" is not a windows/dos command - I added a makefile 
>variable $(TIME) which is empty for this system.
>
>Finally, I get a slew of test failures which make me worry I got the 
>fortran wrong, trimmed output from "make tests" is attached. With 
>the fixes it appears to be OK apart from the map part.
>
>I shall try to look at the python bindings again soon. Leaving 
>tomorrow for the APS user meeting  for a week and then the UK for 
>the week after.
>
>Best wishes,
>
>Jon
>
>
>
>
>Herbert J. Bernstein wrote:
>>The CBFlib release at
>>
>>    http://www.bernstein-plus-sons.com/software/CBF
>>
>>has been upgraded to CBFlib_0.7.7 subrelease 0.7.7.4 of 6 May 2007.
>>
>>For those used to CBFlib_0.7.6.1, this is a major revision, with
>>an implementation of byte offset compression, and extension of
>>the packed compression, support for reading with f90 routines,
>>support for 3d images, and much faster I/O.  A draft of the
>>latest draft imgCIF dictionary (version 1.5.2) is included
>>and can also be seen at
>>
>>    http://www.bernstein-plus-sons.com/software/CBF/doc
>>
>>For those who have already been using CBFlib_0.7.7, the changes
>>in this version are to correct an error in the ordering of dimensions
>>in some image writes, and adjust the ordering of dimension
>>declarations versus the actual array declarations to work with
>>more f90 compilers.  The draft dictionary has been updated
>>too include the latest suggestions from the recent discussion
>>on the imgcif list.
>>
>>Our thanks to:
>>
>>    W. Kabsch for the f90 implementation of A. Hammersley's
>>byte offset compression and the initial F90 code to read
>>CBFs,
>>    J. P. Abrahams and CCP4 for permission to incorporate the
>>logic of packed_c.c into CBFlib under the gnu open source licenses,
>>    E. Eikenberry for a very fast C-implementation of byte offset
>>compression and for helpful suggestions in speeding things up
>>in general,
>>    H. Powell for pointing out the need to reorder the F90 declarations
>>    A. Hammersley and J. Wright for many helpful suggestions, especially
>>with respect to beam centering and real arrays,
>>    and these people and many other members of the community for testing
>>and suggestions and a great deal of patience as we work though problems.
>>
>>    Bug reports, comments and suggestions would be much appreciated.
>>
>>    -- Herbert
>
>
>
>20a21,22
>>        INTEGER(1)                 MASK1
>>        INTEGER(8)                 MASK8
>34c36,37
><         BITCODE = IAND(BBYTE,Z''`000000FF''`)
>---
>>          MASK1 = TRANSFER(Z''`000000FF''`,BBYTE)
>>          BITCODE = IAND(BBYTE,MASK1)
>43c46
><	      TBITCODE = IAND(BBYTE,Z''`000000FF''`)
>---
>>	      TBITCODE = IAND(BBYTE,MASK1)
>65c68,69
><         TBITCODE = 
>ISHFT(IAND(TBITCODE,Z''`000000FF''`),-(BCOUNT-(COUNT-LBITCOUNT)) )
>---
>>          MASK8 = TRANSFER(Z''`000000FF''`,TBITCODE)
>>          TBITCODE = ISHFT(IAND(TBITCODE,MASK8),-(BCOUNT-(COUNT-LBITCOUNT)) )
>
>gcc -g -O2  -Wall  -DGNUGETOPT -I./include -I./src  \
>               ./examples/makecbf.c  -L./lib \
>       -lcbf -lm -limg -o bin/makecbf
>gcc -g -O2  -Wall  -DGNUGETOPT -I./include -I./src  \
>               ./examples/img2cif.c ./lib/getopt.o -L./lib \
>       -lcbf -lm -limg -o bin/img2cif
>gcc -g -O2  -Wall  -DGNUGETOPT -I./include -I./src  \
>               ./examples/cif2cbf.c ./lib/getopt.o -L./lib \
>       -lcbf -lm -limg -o bin/cif2cbf
>./bin/makecbf example.mar2300 makecbf.cbf
>./bin/img2cif -c packed -m headers -d digest \
>	-e base64  example.mar2300  img2cif_packed.cif
>./bin/img2cif -c canonical -m headers -d digest \
>	-e base64  example.mar2300  img2cif_canonical.cif
>./bin/img2cif -c packed -m headers -d digest \
>	-e none  example.mar2300  img2cif_packed.cbf
>./bin/img2cif -c canonical -m headers -d digest \
>	-e none example.mar2300  img2cif_canonical.cbf
>./bin/cif2cbf -e none -c packed \
>	img2cif_canonical.cif cif2cbf_packed.cbf
>./bin/cif2cbf -e none -c canonical \
>	img2cif_packed.cif cif2cbf_canonical.cbf
>cmp cif2cbf_packed.cbf    makecbf.cbf
>cmp cif2cbf_packed.cbf    img2cif_packed.cbf
>cmp cif2cbf_canonical.cbf img2cif_canonical.cbf
>gcc -g -O2  -Wall  -DGNUGETOPT -I./include -I./src  \
>               ./examples/convert_image.c ./examples/img.c 
>./lib/getopt.o -L./lib \
>       -lcbf -lm -o bin/convert_image
>gcc -g -O2  -Wall  -DGNUGETOPT -I./include -I./src  \
>               ./examples/convert_minicbf.c ./lib/getopt.o -L./lib \
>       -lcbf -lm -o bin/convert_minicbf
>g++ -g -O2  -Wall  -DGNUGETOPT -I./include -I./src  \
>               ./examples/testcell.C -L./lib \
>       -lcbf -lm -o bin/testcell
>gcc -g -O2  -Wall  -DGNUGETOPT -I./include -I./src  \
>               ./examples/testreals.c -L./lib \
>       -lcbf -lm -o bin/testreals
>gcc -g -O2  -Wall  -DGNUGETOPT -I./include -I./src  \
>               ./examples/testflat.c -L./lib \
>       -lcbf -lm -o bin/testflat
>gcc -g -O2  -Wall  -DGNUGETOPT -I./include -I./src  \
>               ./examples/testflatpacked.c -L./lib \
>       -lcbf -lm -o bin/testflatpacked
>g95 -g  ./examples/test_xds_binary.f90 \
>	-L./lib -lfcb -o bin/test_xds_binary
>g95 -g  ./examples/test_fcb_read_image.f90 \
>	-L./lib -lfcb -o bin/test_fcb_read_image
>./bin/cif2cbf -e hex -c none \
>	makecbf.cbf cif2cbf_ehcn.cif
>./bin/cif2cbf -e none -c packed \
>	cif2cbf_ehcn.cif cif2cbf_encp.cbf
>cmp makecbf.cbf cif2cbf_encp.cbf
>./bin/cif2cbf -i 9ins.cif -o 9ins.cbf
>cmp 9ins.cif 9ins.cbf
>./bin/convert_image -F -c diffrn_data_frame=diffrn_frame_data 
>example.mar2300 converted_flat.cbf
>  Pixel area, projected area: 0.0225         , 0.0157899     
>cmp converted_flat.cbf converted_flat_orig.cbf
>./bin/convert_image -c diffrn_data_frame=diffrn_frame_data 
>example.mar2300 converted.cbf
>  Pixel area, projected area: 0.0225         , 0.0157899     
>cmp converted.cbf converted_orig.cbf
>./bin/testcell < testcell.dat > testcell.prt
>cmp testcell.prt testcell_orig.prt
>testcell.prt testcell_orig.prt differ: char 28, line 1
>./bin/convert_image -F -c diffrn_data_frame=diffrn_frame_data  -d 
>adscquantum315 mb_LP_1_001.img adscconverted_flat.cbf
>  Pixel area, projected area: 0.0105243      , 0.00703457    
>cmp adscconverted_flat.cbf adscconverted_flat_orig.cbf
>./bin/convert_image -c diffrn_data_frame=diffrn_frame_data  -d 
>adscquantum315 mb_LP_1_001.img adscconverted.cbf
>  Pixel area, projected area: 0.0105243      , 0.00703457    
>cmp adscconverted.cbf adscconverted_orig.cbf
>./bin/testreals
>cmp testrealin.cbf testrealout.cbf
>./bin/testflat
>cmp testflatin.cbf testflatout.cbf
>./bin/testflatpacked
>cmp testflatpackedin.cbf testflatpackedout.cbf
>echo testflatout.cbf |  ./bin/test_xds_binary > test_xds_bin_testflatout.out
>diff -b -c test_xds_bin_testflatout.out test_xds_bin_testflatout_orig.out
>echo testflatpackedout.cbf |  ./bin/test_xds_binary > 
>test_xds_bin_testflatpackedout.out
>diff -b -c test_xds_bin_testflatpackedout.out 
>test_xds_bin_testflatpackedout_orig.out
>echo testflatout.cbf |  ./bin/test_fcb_read_image  > 
>test_fcb_read_testflatout.out
>diff test_fcb_read_testflatout.out test_fcb_read_testflatout_orig.out
>1,1608c1,7
><   NAME OF TEST CBF
><   1000 x 1000 I4 TEST
><   1000 x 1000 I2 TEST
><   1000 x 1000 I4 TEST, WITH -3 on diag and transpose
><   1000 x 1000 I2 TEST, WITH -3 on diag and transpose
><   50 x 60 x 70 3D_I4 TEST
><  KFRAME( 40 , 40 , 50 ) =  1000 , SHOULD BE  -3
><  KFRAME( 1 , 41 , 50 ) =  1000 , SHOULD BE  89
><  KFRAME( 41 , 41 , 50 ) =  1000 , SHOULD BE  -3
><  KFRAME( 42 , 42 , 50 ) =  1000 , SHOULD BE  -3
><  KFRAME( 43 , 43 , 50 ) =  1000 , SHOULD BE  -3
><  KFRAME( 44 , 44 , 50 ) =  1000 , SHOULD BE  -3
>[ many lines snipped ]
>
><  KFRAME( 14 , 13 , 50 ) =  952 , SHOULD BE  1000
><  KFRAME( 15 , 13 , 50 ) =  993 , SHOULD BE  1000
><  KFRAME( 16 , 13 , 50 ) =  999 , SHOULD BE  1000
><  KFRAME( 5 , 14 , 50 ) =  999 , SHOULD BE  1000 <  KFRAME( 6 , 14 
>, 50 ) =  998 , SHOULD BE  1000
><  KFRAME( 7 , 14 , 50 ) =  996 , SHOULD BE  1000
><  KFRAME( 8 , 14 , 50 ) =  990 , SHOULD BE  1000
><  KFRAME( 9 , 14 , 50 ) =  982 , SHOULD BE  1000
>[ many lines snipped ]
><  KFRAME( 48 , 60 , 70 ) =  995 , SHOULD BE  1000
><  KFRAME( 49 , 60 , 70 ) =  997 , SHOULD BE  1000
><  KFRAME( 50 , 60 , 70 ) =  997 , SHOULD BE  1000
><  TESTS COMPLETED
>---
>>    NAME OF TEST CBF
>>    1000 x 1000 I4 TEST
>>    1000 x 1000 I2 TEST
>>    1000 x 1000 I4 TEST, WITH -3 on diag and transpose
>>    1000 x 1000 I2 TEST, WITH -3 on diag and transpose
>>    50 x 60 x 70 3D_I4 TEST
>>   TESTS COMPLETED
>
>######################################################################
>#  Makefile - command file for make to create CBFlib                 #
>#                                                                    #
># Version 0.7.7 26 April 2007                                        #
>#                                                                    #
>#                          Paul Ellis and                            #
>#         Herbert J. Bernstein (yaya@bernstein-plus-sons.com)        #
>#                                                                    #
># (C) Copyright 2006 Herbert J. Bernstein                            #
>#                                                                    #
>######################################################################
>
>######################################################################
>#                                                                    #
># YOU MAY REDISTRIBUTE THE CBFLIB PACKAGE UNDER THE TERMS OF THE GPL #
>#                                                                    #
># ALTERNATIVELY YOU MAY REDISTRIBUTE THE CBFLIB API UNDER THE TERMS  #
># OF THE LGPL                                                        #
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>######################################################################
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>######################################################################
>
>######################### LGPL NOTICES ###############################
>#                                                                    #
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>#
># Definitions to get gnu version of getopt or system version of getopt
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>ifeq ($(GETOPT),)
>   GETOPT	=	getopt-1.1.4_cbf
>endif
>
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>#CC	= gcc
>#C++	= g++
>#CFLAGS  = -g -O2  -Wall -ansi -pedantic
>#F90C = gfortran
>#F90FLAGS = -g
>#F90LDFLAGS =
>#TIME = time
>#########################################################
>#
>#  Appropriate compiler definitions for Mingw
>#
>#########################################################
>CC	= gcc
>C++	= g++
>CFLAGS  = -g -O2  -Wall
>F90C = g95
>F90FLAGS = -g
>F90LDFLAGS =
>TIME =
>#########################################################
>#
>#  Appropriate compiler definitions for AIX
>#
>#########################################################
>#CC	= xlc
>#C++	= xlC
>#CFLAGS  = -g -O2  -Wall
>#F90C = xlf90
>#F90FLAGS = -g -qsuffix=f=f90
>#F90LDFLAGS =
>#TIME = time
>
>#
># Program to use to pack shars
>#
>SHAR	= echo 'no shar for ming'
>#SHAR	= /usr/local/bin/gshar
>
>#
># Program to use to create archives
>#
>AR	= ar
>
>#
># Program to use to add an index to an archive
>#
>RANLIB  = ranlib
>
>#
># Program to use to decompress a data file
>#
>DECOMPRESS = bunzip2
>
>#
># Extension for compressed data file (with period)
>#
>CEXT = .bz2
>
># Program to use to retrieve a URL
>
>#DOWNLOAD = /sw/bin/wget
>DOWNLOAD = wget
>
>
>#
># Directories
>#
>ROOT     = .
>LIB      = $(ROOT)/lib
>BIN      = $(ROOT)/bin
>SRC      = $(ROOT)/src
>INCLUDE  = $(ROOT)/include
>M4       = $(ROOT)/m4
>EXAMPLES = $(ROOT)/examples
>DOC      = $(ROOT)/doc
>GRAPHICS = $(ROOT)/html_graphics
>DATADIR  = $(ROOT)/../CBFlib_$(VERSION)_Data_Files
>INSTALLDIR  = $(HOME)
>
>#
># URL from which to retrieve the data directory
>#
>DATAURL	 = 
>http://arcib.dowling.edu/software/CBFlib/downloads/version_$(VERSION)/CBFlib_$(VERSION)_Data_Files.tar.gz
>
>
>#
># Include directories
>#
>INCLUDES = -I$(INCLUDE) -I$(SRC)
>
>######################################################################
>#  You should not need to make modifications below this line         #
>######################################################################
>
>#
># Suffixes of files to be used or built
>#
>.SUFFIXES:	.c .o .f90 .m4
>
>.m4.f90:
>		m4 -P $< > $@
>
>.f90.o:
>		$(F90C) -g -c $< -o $@
>
>
>#
># Common dependencies
>#
>COMMONDEP = Makefile
>
>#
># Source files
>#
>SOURCE   =  $(SRC)/cbf.c               \
>             $(SRC)/cbf_alloc.c         \
>             $(SRC)/cbf_ascii.c         \
>             $(SRC)/cbf_binary.c        \
>             $(SRC)/cbf_byte_offset.c   \
>             $(SRC)/cbf_canonical.c     \
>             $(SRC)/cbf_codes.c         \
>             $(SRC)/cbf_compress.c      \
>             $(SRC)/cbf_context.c       \
>             $(SRC)/cbf_file.c          \
>             $(SRC)/cbf_lex.c           \
>             $(SRC)/cbf_packed.c        \
>             $(SRC)/cbf_predictor.c     \
>             $(SRC)/cbf_read_binary.c   \
>             $(SRC)/cbf_read_mime.c     \
>             $(SRC)/cbf_simple.c        \
>             $(SRC)/cbf_string.c        \
>             $(SRC)/cbf_stx.c           \
>             $(SRC)/cbf_tree.c          \
>             $(SRC)/cbf_uncompressed.c  \
>             $(SRC)/cbf_write.c         \
>             $(SRC)/cbf_write_binary.c  \
>             $(SRC)/md5c.c
>
>F90SOURCE = $(SRC)/fcb_atol_wcnt.f90     \
>             $(SRC)/fcb_ci_strncmparr.f90 \
>             $(SRC)/fcb_exit_binary.f90   \
>             $(SRC)/fcb_nblen_array.f90   \
>             $(SRC)/fcb_next_binary.f90   \
>             $(SRC)/fcb_open_cifin.f90    \
>             $(SRC)/fcb_packed.f90        \
>             $(SRC)/fcb_read_bits.f90     \
>             $(SRC)/fcb_read_byte.f90     \
>             $(SRC)/fcb_read_image.f90    \
>             $(SRC)/fcb_read_line.f90     \
>             $(SRC)/fcb_read_xds_i2.f90   \
>             $(SRC)/fcb_skip_whitespace.f90 \
>             $(EXAMPLES)/test_fcb_read_image.f90 \
>             $(EXAMPLES)/test_xds_binary.f90
>            
>           
>#
># Header files
>#
>HEADERS   =  $(INCLUDE)/cbf.h                  \
>              $(INCLUDE)/cbf_alloc.h            \
>              $(INCLUDE)/cbf_ascii.h            \
>              $(INCLUDE)/cbf_binary.h           \
>              $(INCLUDE)/cbf_byte_offset.h      \
>              $(INCLUDE)/cbf_canonical.h        \
>              $(INCLUDE)/cbf_codes.h            \
>              $(INCLUDE)/cbf_compress.h         \
>              $(INCLUDE)/cbf_context.h          \
>              $(INCLUDE)/cbf_file.h             \
>              $(INCLUDE)/cbf_lex.h              \
>              $(INCLUDE)/cbf_packed.h           \
>              $(INCLUDE)/cbf_predictor.h        \
>              $(INCLUDE)/cbf_read_binary.h      \
>              $(INCLUDE)/cbf_read_mime.h        \
>              $(INCLUDE)/cbf_simple.h           \
>              $(INCLUDE)/cbf_string.h           \
>              $(INCLUDE)/cbf_stx.h              \
>              $(INCLUDE)/cbf_tree.h             \
>              $(INCLUDE)/cbf_uncompressed.h     \
>              $(INCLUDE)/cbf_write.h            \
>              $(INCLUDE)/cbf_write_binary.h     \
>              $(INCLUDE)/global.h               \
>              $(INCLUDE)/md5.h
>
>#
># m4 macro files
>#
>M4FILES   = $(M4)/fcblib_defines.m4            \
>			$(M4)/fcb_exit_binary.m4           \
>             $(M4)/fcb_next_binary.m4           \
>             $(M4)/fcb_open_cifin.m4            \
>             $(M4)/fcb_packed.m4                \
>             $(M4)/fcb_read_bits.m4             \
>             $(M4)/fcb_read_image.m4            \
>             $(M4)/fcb_read_xds_i2.m4           \
>             $(M4)/test_fcb_read_image.m4       \
>             $(M4)/test_xds_binary.m4
>
>
>#
># Documentation files
>#
>DOCUMENTS = $(DOC)/CBFlib.pdf                   \
>             $(DOC)/CBFlib.rtf                   \
>             $(DOC)/CBFlib_NOTICES.html          \
>             $(DOC)/CBFlib_NOTICES.txt           \
>             $(DOC)/ChangeLog                    \
>             $(DOC)/ChangeLog.html               \
>             $(DOC)/MANIFEST                     \
>             $(DOC)/example.html
>
>#
># HTML Graphics files
>#
>JPEGS     = $(GRAPHICS)/CBFbackground.jpg      \
>             $(GRAPHICS)/CBFbig.jpg             \
>             $(GRAPHICS)/CBFbutton.jpg          \
>             $(GRAPHICS)/cbflibbackground.jpg   \
>             $(GRAPHICS)/cbflibbig.jpg          \
>             $(GRAPHICS)/cbflibbutton.jpg       \
>             $(GRAPHICS)/cifhome.jpg            \
>             $(GRAPHICS)/iucrhome.jpg           \
>             $(GRAPHICS)/noticeButton.jpg
>
>
>#
># Default: instructions
>#
>default:
>	@echo ' '
>	@echo '***************************************************************'
>	@echo ' '
>	@echo ' PLEASE READ README and doc/CBFlib_NOTICES.txt'
>	@echo ' '
>	@echo ' Before making the CBF library and example programs, check'
>	@echo ' that the C compiler name and flags are correct:'
>	@echo ' '
>	@echo ' The current values are:'
>	@echo ' '
>	@echo '   $(CC) $(CFLAGS)'
>	@echo ' '
>	@echo ' Before installing the CBF library and example programs, check'
>	@echo ' that the install directory is correct:'
>	@echo ' '
>	@echo ' The current value :'
>	@echo ' '
>	@echo '   $(INSTALLDIR) '
>	@echo ' '
>	@echo ' To compile the CBF library and example programs type:'
>	@echo ' '
>	@echo '   make clean'
>	@echo '   make all'
>	@echo ' '
>	@echo ' To run a set of tests type:'
>	@echo ' '
>	@echo '   make tests'
>	@echo ' '
>	@echo ' The tests assume that several data files are in the 
>directory' $(DATADIR)
>	@echo ' This directory can be obtained from'
>	@echo ' '
>	@echo ' ' $(DATAURL)
>	@echo ' '
>	@echo ' To clean up the directories type:'
>	@echo ' '
>	@echo '   make clean'
>	@echo ' '
>	@echo ' To install the library and binaries type:'
>	@echo ' '
>	@echo '   make install'
>	@echo ' '
>	@echo '***************************************************************'
>	@echo ' '
>
>#
># Compile the library and examples
>#
>all:	$(LIB) $(BIN) $(SOURCE) $(F90SOURCE) $(HEADERS)  \
>		$(LIB)/libcbf.a          \
>		$(LIB)/libfcb.a          \
>#		$(LIB)/libmap.a          \
>         $(BIN)/convert_image     \
>         $(BIN)/convert_minicbf   \
>         $(BIN)/makecbf           \
>         $(BIN)/img2cif           \
>         $(BIN)/cif2cbf           \
>		$(BIN)/testcell          \
>		$(BIN)/cif2c             \
>		$(BIN)/testreals         \
>		$(BIN)/testflat          \
>		$(BIN)/testflatpacked    \
>		$(BIN)/test_xds_binary   \
>		$(BIN)/test_fcb_read_image
>
>
>install:  all $(INSTALLDIR) $(INSTALLDIR)/lib $(INSTALLDIR)/bin
>		-cp $(INSTALLDIR)/lib/libcbf.a $(INSTALLDIR)/lib/libcbf_old.a
>		cp $(LIB)/libcbf.a $(INSTALLDIR)/lib/libcbf.a
>		-cp $(INSTALLDIR)/bin/convert_image 
>$(INSTALLDIR)/bin/convert_image_old
>		cp $(BIN)/convert_image $(INSTALLDIR)/bin/convert_image
>		-cp $(INSTALLDIR)/bin/convert_minicbf 
>$(INSTALLDIR)/bin/convert_minicbf_old
>		cp $(BIN)/convert_minicbf $(INSTALLDIR)/bin/convert_minicbf
>		-cp $(INSTALLDIR)/bin/makecbf $(INSTALLDIR)/bin/makecbf_old
>		cp $(BIN)/makecbf $(INSTALLDIR)/bin/makecbf
>		-cp $(INSTALLDIR)/bin/img2cif $(INSTALLDIR)/bin/img2cif_old
>		cp $(BIN)/img2cif $(INSTALLDIR)/bin/img2cif
>		-cp $(INSTALLDIR)/bin/cif2cbf $(INSTALLDIR)/bin/cif2cbf_old
>		cp $(BIN)/cif2cbf $(INSTALLDIR)/bin/cif2cbf
>		-cp $(INSTALLDIR)/bin/cif2c $(INSTALLDIR)/bin/cif2c_old
>		cp $(BIN)/cif2c $(INSTALLDIR)/bin/cif2c
>		-cp $(INSTALLDIR)/bin/testreals $(INSTALLDIR)/bin/testreals_old
>		cp $(BIN)/testreals $(INSTALLDIR)/bin/testreals
>		-cp $(INSTALLDIR)/bin/testflat $(INSTALLDIR)/bin/testflat_old
>		cp $(BIN)/testflat $(INSTALLDIR)/bin/testflat
>		-cp $(INSTALLDIR)/bin/testflatpacked 
>$(INSTALLDIR)/bin/testflatpacked_old
>		cp $(BIN)/testflatpacked $(INSTALLDIR)/bin/testflatpacked
>		chmod 644 $(INSTALLDIR)/lib/libcbf.a
>		chmod 755 $(INSTALLDIR)/bin/convert_image
>		chmod 755 $(INSTALLDIR)/bin/convert_minicbf
>		chmod 755 $(INSTALLDIR)/bin/makecbf
>		chmod 755 $(INSTALLDIR)/bin/img2cif
>		chmod 755 $(INSTALLDIR)/bin/cif2cbf
>		chmod 755 $(INSTALLDIR)/bin/cif2c
>		chmod 755 $(INSTALLDIR)/bin/testreals
>		chmod 755 $(INSTALLDIR)/bin/testflat
>		chmod 755 $(INSTALLDIR)/bin/testflatpacked
>
>
>#
># Changes if a local gnu getopt is used
>#
>
>ifneq ($(GETOPT),SYSTEM)
>CFLAGS		+=	-DGNUGETOPT
>GOPTLIB		=	$(LIB)/getopt.o
>GOPTINC		=	$(INCLUDE)/getopt.h
>GOPTCLEAN	=	$(GETOPT)_clean
>GOPTBUILD	=	$(GETOPT)_build
>
>GOPTURL		= 
>	http://arcib.dowling.edu/software/getopt/downloads/$(GETOPT).tar.gz
>
>
>#
># getopt package
>#
>$(GETOPT):
>		$(DOWNLOAD) $(GOPTURL)
>		tar -xvf $(GETOPT).tar.gz
>		-rm $(GETOPT).tar.gz
>
>#
># build getopt
>#
>$(LIB)/getopt.o:		$(GOPTBUILD)
>		(cd $(GETOPT); cp gnu/getopt.o ../$(LIB) )
>$(INCLUDE)/getopt.h:	$(GOPTBUILD)
>		(cd $(GETOPT); cp gnu/getopt.h ../$(INCLUDE) )
>$(GOPTBUILD): 		$(GETOPT)
>		(cd $(GETOPT); sed 
>"1,\$$s/WITHOUT_GETTEXT=0/WITHOUT_GETTEXT=1/g" Makefile \
>		  | sed "1,\$$s/WITH_GETTEXT/WITHOUT_GETTEXT/g"> 
>Makefile_CBF; \
>		  make -f Makefile_CBF GNUGETOPT=1 LIBCGETOPT=0 gnu/getopt.o; \
>		  touch ../$(GOPTBUILD))
>$(GOPTCLEAN):
>		-(cd $(GETOPT); make clean)
>		-rm $(GETOPT)/gnu/getopt.o
>		-rm $(GOPTBUILD)
>
>endif
>
>
>#
># Directories
>#
>$(INSTALLDIR):
>	mkdir -p $(INSTALLDIR)
>	mkdir $(INSTALLDIR)/lib
>	mkdir $(INSTALLDIR)/bin
>
>$(LIB):
>	mkdir $(LIB)
>
>$(BIN):
>	mkdir $(BIN)
>
>#
># Parser
>#
>$(SRC)/cbf_stx.c: $(SRC)/cbf.stx.y
>	bison $(SRC)/cbf.stx.y -o $(SRC)/cbf.stx.tab.c -d
>	mv $(SRC)/cbf.stx.tab.c $(SRC)/cbf_stx.c
>	mv $(SRC)/cbf.stx.tab.h $(INCLUDE)/cbf_stx.h
>
>#
># CBF library
>#
>$(LIB)/libcbf.a: $(SOURCE) $(HEADERS) $(COMMONDEP)
>	$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) -c $(SOURCE)
>	$(AR) cr $@ *.o
>	rm *.o
>	$(RANLIB) $@
>
>#
># IMG library
>#
>$(LIB)/libimg.a: $(EXAMPLES)/img.c $(HEADERS) $(COMMONDEP)
>	$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) -c $(EXAMPLES)/img.c
>	$(AR) cr $@ *.o
>	rm *.o
>	$(RANLIB) $@
>
>#
># CBF and IMG libraries
>#
>CBF_IMG_LIBS:  $(LIB)/libcbf.a $(LIB)/libimg.a
>
>
>#
># FCB library
>#
>$(LIB)/libfcb.a: $(F90SOURCE) $(COMMONDEP)
>	$(F90C) $(F90FLAGS) -c $(F90SOURCE)
>	$(AR) cr $@ *.o
>	rm *.o
>	$(RANLIB) $@
>
>
>#
># F90SOURCE
>#
>$(SRC)/fcb_exit_binary.f90: $(M4)/fcb_exit_binary.m4 $(M4)/fcblib_defines.m4
>	(cd $(M4); m4 -P fcb_exit_binary.m4) > $(SRC)/fcb_exit_binary.f90
>$(SRC)/fcb_next_binary.f90: $(M4)/fcb_next_binary.m4 $(M4)/fcblib_defines.m4
>	(cd $(M4); m4 -P fcb_next_binary.m4) > $(SRC)/fcb_next_binary.f90
>$(SRC)/fcb_open_cifin.f90: $(M4)/fcb_open_cifin.m4 $(M4)/fcblib_defines.m4
>	(cd $(M4); m4 -P fcb_open_cifin.m4)  > $(SRC)/fcb_open_cifin.f90
>$(SRC)/fcb_packed.f90: $(M4)/fcb_packed.m4 $(M4)/fcblib_defines.m4
>	(cd $(M4); m4 -P fcb_packed.m4)      > $(SRC)/fcb_packed.f90
>$(SRC)/fcb_read_bits.f90: $(M4)/fcb_read_bits.m4 $(M4)/fcblib_defines.m4
>	(cd $(M4); m4 -P fcb_read_bits.m4)   > $(SRC)/fcb_read_bits.f90
>$(SRC)/fcb_read_image.f90: $(M4)/fcb_read_image.m4 $(M4)/fcblib_defines.m4
>	(cd $(M4); m4 -P fcb_read_image.m4)  > $(SRC)/fcb_read_image.f90
>$(SRC)/fcb_read_xds_i2.f90: $(M4)/fcb_read_xds_i2.m4 $(M4)/fcblib_defines.m4
>	(cd $(M4); m4 -P fcb_read_xds_i2.m4) > $(SRC)/fcb_read_xds_i2.f90
>$(EXAMPLES)/test_fcb_read_image.f90: $(M4)/test_fcb_read_image.m4 
>$(M4)/fcblib_defines.m4
>	(cd $(M4); m4 -P test_fcb_read_image.m4) > 
>$(EXAMPLES)/test_fcb_read_image.f90
>$(EXAMPLES)/test_xds_binary.f90: $(M4)/test_xds_binary.m4 
>$(M4)/fcblib_defines.m4
>	(cd $(M4); m4 -P test_xds_binary.m4) > $(EXAMPLES)/test_xds_binary.f90
>
>#
># convert_image example program
>#
>$(BIN)/convert_image: $(LIB)/libcbf.a $(EXAMPLES)/convert_image.c 
>$(EXAMPLES)/img.c \
>					$(GOPTLIB)	$(GOPTINC)
>	$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
>               $(EXAMPLES)/convert_image.c $(EXAMPLES)/img.c 
>$(GOPTLIB) -L$(LIB) \
>	      -lcbf -lm -o $@
>#
># convert_minicbf example program
>#
>$(BIN)/convert_minicbf: $(LIB)/libcbf.a $(EXAMPLES)/convert_minicbf.c \
>					$(GOPTLIB)	$(GOPTINC)
>	$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
>               $(EXAMPLES)/convert_minicbf.c $(GOPTLIB) -L$(LIB) \
>	      -lcbf -lm -o $@
>
>#
># makecbf example program
>#
>$(BIN)/makecbf: $(LIB)/libcbf.a $(EXAMPLES)/makecbf.c $(LIB)/libimg.a
>	$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
>               $(EXAMPLES)/makecbf.c  -L$(LIB) \
>	      -lcbf -lm -limg -o $@
>
>#
># img2cif example program
>#
>$(BIN)/img2cif: $(LIB)/libcbf.a $(EXAMPLES)/img2cif.c $(LIB)/libimg.a \
>					$(GOPTLIB)	$(GOTPINC)
>	$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
>               $(EXAMPLES)/img2cif.c $(GOPTLIB) -L$(LIB) \
>	      -lcbf -lm -limg -o $@
>
>#
># cif2cbf example program
>#
>$(BIN)/cif2cbf: $(LIB)/libcbf.a $(EXAMPLES)/cif2cbf.c $(LIB)/libimg.a \
>					$(GOPTLIB)	$(GOPTINC)
>	$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
>               $(EXAMPLES)/cif2cbf.c $(GOPTLIB) -L$(LIB) \
>	      -lcbf -lm -limg -o $@
>#
># testcell example program
>#
>$(BIN)/testcell: $(LIB)/libcbf.a $(EXAMPLES)/testcell.C
>	$(C++) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
>               $(EXAMPLES)/testcell.C -L$(LIB) \
>	      -lcbf -lm -o $@
>
>#
># cif2c example program
>#
>$(BIN)/cif2c: $(LIB)/libcbf.a $(EXAMPLES)/cif2c.c
>	$(C++) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
>               $(EXAMPLES)/cif2c.c -L$(LIB) \
>	      -lcbf -lm -o $@
>
>#
># testreals example program
>#
>$(BIN)/testreals: $(LIB)/libcbf.a $(EXAMPLES)/testreals.c
>	$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
>               $(EXAMPLES)/testreals.c -L$(LIB) \
>	      -lcbf -lm -o $@
>#
># testflat example program
>#
>$(BIN)/testflat: $(LIB)/libcbf.a $(EXAMPLES)/testflat.c
>	$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
>               $(EXAMPLES)/testflat.c -L$(LIB) \
>	      -lcbf -lm -o $@
>#
># testflatpacked example program
>#
>$(BIN)/testflatpacked: $(LIB)/libcbf.a $(EXAMPLES)/testflatpacked.c
>	$(CC) $(CFLAGS) $(INCLUDES) $(WARNINGS) \
>               $(EXAMPLES)/testflatpacked.c -L$(LIB) \
>	      -lcbf -lm -o $@
>	     
>#
># test_xds_binary example program
>#
>$(BIN)/test_xds_binary: $(LIB)/libfcb.a $(EXAMPLES)/test_xds_binary.f90
>	$(F90C) $(F90FLAGS) $(F90LDFLAGS) $(EXAMPLES)/test_xds_binary.f90 \
>		-L$(LIB) -lfcb -o $@
>
>#
># test_fcb_read_image example program
>#
>$(BIN)/test_fcb_read_image: $(LIB)/libfcb.a 
>$(EXAMPLES)/test_fcb_read_image.f90
>	$(F90C) $(F90FLAGS) $(F90LDFLAGS) $(EXAMPLES)/test_fcb_read_image.f90 \
>		-L$(LIB) -lfcb -o $@
>
>#
># Data files for tests
>#
>
>$(DATADIR):
>		(cd ..; $(DOWNLOAD) $(DATAURL))
>		(cd ..; tar -xvf CBFlib_$(VERSION)_Data_Files.tar.gz)
>		-(cd ..; rm CBFlib_$(VERSION)_Data_Files.tar.gz)
>
>
>example.mar2300:	$(DATADIR) $(DATADIR)/example.mar2300$(CEXT)
>		$(DECOMPRESS) < $(DATADIR)/example.mar2300$(CEXT) > 
>example.mar2300
>
>
>converted_flat_orig.cbf:	$(DATADIR) 
>$(DATADIR)/converted_flat_orig.cbf$(CEXT)
>		$(DECOMPRESS) < 
>$(DATADIR)/converted_flat_orig.cbf$(CEXT) > converted_flat_orig.cbf
>
>
>adscconverted_flat_orig.cbf:	$(DATADIR) 
>$(DATADIR)/adscconverted_flat_orig.cbf$(CEXT)
>		$(DECOMPRESS) < 
>$(DATADIR)/adscconverted_flat_orig.cbf$(CEXT) > 
>adscconverted_flat_orig.cbf
>
>
>converted_orig.cbf:	$(DATADIR) $(DATADIR)/converted_orig.cbf$(CEXT)
>		$(DECOMPRESS) < 
>$(DATADIR)/converted_orig.cbf$(CEXT) > converted_orig.cbf
>
>
>adscconverted_orig.cbf:	$(DATADIR) 
>$(DATADIR)/adscconverted_orig.cbf$(CEXT)
>		$(DECOMPRESS) < 
>$(DATADIR)/adscconverted_orig.cbf$(CEXT) > adscconverted_orig.cbf
>
>
>mb_LP_1_001.img:	$(DATADIR) $(DATADIR)/mb_LP_1_001.img$(CEXT)
>		$(DECOMPRESS) < $(DATADIR)/mb_LP_1_001.img$(CEXT) > 
>mb_LP_1_001.img
>
>
>9ins.cif:	$(DATADIR) $(DATADIR)/9ins.cif$(CEXT)
>		$(DECOMPRESS) < $(DATADIR)/9ins.cif$(CEXT) > 9ins.cif
>
>testcell_orig.prt:	$(DATADIR) $(DATADIR)/testcell_orig.prt$(CEXT)
>		$(DECOMPRESS) < $(DATADIR)/testcell_orig.prt$(CEXT) > 
>testcell_orig.prt
>
>testrealin.cbf:	$(DATADIR) $(DATADIR)/testrealin.cbf$(CEXT)
>		$(DECOMPRESS) < $(DATADIR)/testrealin.cbf$(CEXT) > 
>testrealin.cbf
>
>testflatin.cbf:	$(DATADIR) $(DATADIR)/testflatin.cbf$(CEXT)
>		$(DECOMPRESS) < $(DATADIR)/testflatin.cbf$(CEXT) > 
>testflatin.cbf
>
>testflatpackedin.cbf:	$(DATADIR) $(DATADIR)/testflatpackedin.cbf$(CEXT)
>		$(DECOMPRESS) < 
>$(DATADIR)/testflatpackedin.cbf$(CEXT) > testflatpackedin.cbf
>
>test_xds_bin_testflatout_orig.out:	$(DATADIR) \
>		$(DATADIR)/test_xds_bin_testflatout_orig.out$(CEXT)
>		$(DECOMPRESS) < 
>$(DATADIR)/test_xds_bin_testflatout_orig.out$(CEXT) \
>		> test_xds_bin_testflatout_orig.out
>
>test_xds_bin_testflatpackedout_orig.out: $(DATADIR) \
>		$(DATADIR)/test_xds_bin_testflatout_orig.out$(CEXT)
>		$(DECOMPRESS) < 
>$(DATADIR)/test_xds_bin_testflatpackedout_orig.out$(CEXT) \
>		> test_xds_bin_testflatpackedout_orig.out
>
>test_fcb_read_testflatout_orig.out: $(DATADIR) \
>		$(DATADIR)/test_xds_bin_testflatout_orig.out$(CEXT)
>		$(DECOMPRESS) < 
>$(DATADIR)/test_fcb_read_testflatout_orig.out$(CEXT) \
>		> test_fcb_read_testflatout_orig.out
>
>test_fcb_read_testflatpackedout_orig.out: $(DATADIR) \
>		$(DATADIR)/test_xds_bin_testflatpackedout_orig.out$(CEXT)
>		$(DECOMPRESS) < 
>$(DATADIR)/test_fcb_read_testflatpackedout_orig.out$(CEXT) \
>		> test_fcb_read_testflatpackedout_orig.out
>
>
>#
># Tests
>#
>tests:	$(LIB) $(BIN) basic extra
>
>#
># Basic Tests
>#
>
>basic:	$(BIN)/makecbf $(BIN)/img2cif $(BIN)/cif2cbf example.mar2300
>	$(BIN)/makecbf example.mar2300 makecbf.cbf
>	$(BIN)/img2cif -c packed -m headers -d digest \
>		-e base64  example.mar2300  img2cif_packed.cif
>	$(BIN)/img2cif -c canonical -m headers -d digest \
>		-e base64  example.mar2300  img2cif_canonical.cif
>	$(BIN)/img2cif -c packed -m headers -d digest \
>		-e none  example.mar2300  img2cif_packed.cbf
>	$(BIN)/img2cif -c canonical -m headers -d digest \
>		-e none example.mar2300  img2cif_canonical.cbf
>	$(BIN)/cif2cbf -e none -c packed \
>		img2cif_canonical.cif cif2cbf_packed.cbf
>	$(BIN)/cif2cbf -e none -c canonical \
>		img2cif_packed.cif cif2cbf_canonical.cbf
>	-cmp cif2cbf_packed.cbf    makecbf.cbf
>	-cmp cif2cbf_packed.cbf    img2cif_packed.cbf
>	-cmp cif2cbf_canonical.cbf img2cif_canonical.cbf
>
>#
># Extra Tests
>#
>extra:	$(BIN)/convert_image $(BIN)/convert_minicbf $(BIN)/cif2cbf 
>$(BIN)/testcell \
>	$(BIN)/testreals $(BIN)/testflat $(BIN)/testflatpacked \
>	$(BIN)/test_xds_binary $(BIN)/test_fcb_read_image \
>	makecbf.cbf 9ins.cif example.mar2300 converted_orig.cbf 
>mb_LP_1_001.img\
>	adscconverted_orig.cbf testcell_orig.prt testrealin.cbf \
>	testflatin.cbf testflatpackedin.cbf \
>	converted_flat_orig.cbf adscconverted_flat_orig.cbf \
>	test_xds_bin_testflatout_orig.out 
>test_xds_bin_testflatpackedout_orig.out \
>	test_fcb_read_testflatout_orig.out 
>test_fcb_read_testflatpackedout_orig.out
>	$(TIME) $(BIN)/cif2cbf -e hex -c none \
>		makecbf.cbf cif2cbf_ehcn.cif
>	$(TIME) $(BIN)/cif2cbf -e none -c packed \
>		cif2cbf_ehcn.cif cif2cbf_encp.cbf
>	-cmp makecbf.cbf cif2cbf_encp.cbf
>	$(TIME) $(BIN)/cif2cbf -i 9ins.cif -o 9ins.cbf
>	-cmp 9ins.cif 9ins.cbf
>	$(TIME) $(BIN)/convert_image -F -c 
>diffrn_data_frame=diffrn_frame_data example.mar2300 
>converted_flat.cbf
>	-cmp converted_flat.cbf converted_flat_orig.cbf
>	$(TIME) $(BIN)/convert_image -c 
>diffrn_data_frame=diffrn_frame_data example.mar2300 converted.cbf
>	-cmp converted.cbf converted_orig.cbf
>	$(TIME) $(BIN)/testcell < testcell.dat > testcell.prt
>	-cmp testcell.prt testcell_orig.prt
>	$(TIME) $(BIN)/convert_image -F -c 
>diffrn_data_frame=diffrn_frame_data  -d adscquantum315 
>mb_LP_1_001.img adscconverted_flat.cbf
>	-cmp adscconverted_flat.cbf adscconverted_flat_orig.cbf
>	$(TIME) $(BIN)/convert_image -c 
>diffrn_data_frame=diffrn_frame_data  -d adscquantum315 
>mb_LP_1_001.img adscconverted.cbf
>	-cmp adscconverted.cbf adscconverted_orig.cbf
>	$(TIME) $(BIN)/testreals
>	-cmp testrealin.cbf testrealout.cbf
>	$(TIME) $(BIN)/testflat
>	-cmp testflatin.cbf testflatout.cbf
>	$(TIME) $(BIN)/testflatpacked
>	-cmp testflatpackedin.cbf testflatpackedout.cbf
>	echo testflatout.cbf | $(TIME) $(BIN)/test_xds_binary > 
>test_xds_bin_testflatout.out
>	-diff -b -c test_xds_bin_testflatout.out 
>test_xds_bin_testflatout_orig.out
>	echo testflatpackedout.cbf | $(TIME) $(BIN)/test_xds_binary > 
>test_xds_bin_testflatpackedout.out
>	-diff -b -c test_xds_bin_testflatpackedout.out 
>test_xds_bin_testflatpackedout_orig.out
>	echo testflatout.cbf | $(TIME) $(BIN)/test_fcb_read_image  > 
>test_fcb_read_testflatout.out
>	-diff test_fcb_read_testflatout.out test_fcb_read_testflatout_orig.out
>	echo testflatpackedout.cbf | $(TIME) 
>$(BIN)/test_fcb_read_image > test_fcb_read_testflatpackedout.out
>	-diff test_fcb_read_testflatpackedout.out 
>test_fcb_read_testflatpackedout_orig.out
>
>
>#
># Remove all non-source files
>#
>empty:
>	@-rm -f  $(LIB)/libcbf.a
>	@-rm -f  $(LIB)/libfcb.a
>	@-rm -f  $(LIB)/libimg.a
>	@-rm -f  $(LIB)/getopt.o
>	@-rm -f  $(INCLUDE)/getopt.h
>	@-rm -f  $(BIN)/makecbf
>	@-rm -f  $(BIN)/img2cif
>	@-rm -f  $(BIN)/cif2cbf
>	@-rm -f  $(BIN)/convert_image
>	@-rm -f  $(BIN)/convert_minicbf
>	@-rm -f  $(BIN)/test_fcb_read_image
>	@-rm -f  $(BIN)/test_xds_binary
>	@-rm -f  $(BIN)/testcell
>	@-rm -f  $(BIN)/cif2c
>	@-rm -f  $(BIN)/testreals
>	@-rm -f  $(BIN)/testflat
>	@-rm -f  $(BIN)/testflatpacked
>	@-rm -f  makecbf.cbf
>	@-rm -f  img2cif_packed.cif
>	@-rm -f  img2cif_canonical.cif
>	@-rm -f  img2cif_packed.cbf
>	@-rm -f  img2cif_canonical.cbf
>	@-rm -f  img2cif_raw.cbf
>	@-rm -f  cif2cbf_packed.cbf
>	@-rm -f  cif2cbf_canonical.cbf
>	@-rm -f  converted.cbf
>	@-rm -f  adscconverted.cbf
>	@-rm -f  converted_flat.cbf
>	@-rm -f  adscconverted_flat.cbf
>	@-rm -f  cif2cbf_ehcn.cif
>	@-rm -f  cif2cbf_encp.cbf
>	@-rm -f  9ins.cbf
>	@-rm -f  9ins.cif
>	@-rm -f  testcell.prt
>	@-rm -f  example.mar2300
>	@-rm -f  converted_orig.cbf
>	@-rm -f  adscconverted_orig.cbf
>	@-rm -f  converted_flat_orig.cbf
>	@-rm -f  adscconverted_flat_orig.cbf
>	@-rm -f  testrealin.cbf
>	@-rm -f  testrealout.cbf
>	@-rm -f  testflatin.cbf
>	@-rm -f  testflatout.cbf
>	@-rm -f  testflatpackedin.cbf
>	@-rm -f  testflatpackedout.cbf
>	@-rm -f  test_fcb_read_testflatout.out
>	@-rm -f  test_fcb_read_testflatpackedout.out
>	@-rm -f  test_xds_bin_testflatpackedout.out
>	@-rm -f  test_xds_bin_testflatout.out
>	@-rm -f  test_fcb_read_testflatout_orig.out
>	@-rm -f  test_fcb_read_testflatpackedout_orig.out
>	@-rm -f  test_xds_bin_testflatpackedout_orig.out
>	@-rm -f  test_xds_bin_testflatout_orig.out
>	@-rm -f  mb_LP_1_001.img
>	@-rm -f  9ins.cif
>	@-rm -f  testcell_orig.prt
>	@-rm -f  $(SRC)/fcb_exit_binary.f90
>	@-rm -f  $(SRC)/fcb_next_binary.f90
>	@-rm -f  $(SRC)/fcb_open_cifin.f90
>	@-rm -f  $(SRC)/fcb_packed.f90
>	@-rm -f  $(SRC)/fcb_read_bits.f90
>	@-rm -f  $(SRC)/fcb_read_image.f90
>	@-rm -f  $(SRC)/fcb_read_xds_i2.f90
>	@-rm -f  $(EXAMPLES)/test_fcb_read_image.f90
>	@-rm -f  $(EXAMPLES)/test_xds_binary.f90
>
>#
># Remove temporary files
>#
>clean:	$(GOPTCLEAN)
>	@-rm -f core
>	@-rm -f *.o
>	@-rm -f *.u
>	@-rm -f ./lib/getopt.o
>#
># Restore to distribution state
>#
>distclean:	clean empty
>
>#
># Create a Shell Archive for distribution
>#
>
>shar:   $(DOCUMENTS) $(SOURCE) $(SRC)/cbf.stx $(HEADERS) \
>          $(EXAMPLES)/img.c \
>	 $(EXAMPLES)/img.h \
>	 $(EXAMPLES)/makecbf.c $(EXAMPLES)/img2cif.c $(EXAMPLES)/cif2cbf.c \
>	 $(EXAMPLES)/convert_image.c $(EXAMPLES)/testcell.C\
>	 $(EXAMPLES)/template_adscquantum4_2304x2304.cbf \
>	 $(EXAMPLES)/template_mar345_2300x2300.cbf \
>	 README.html README Makefile \
>	 $(JPEGS) 9ins.cif.gz
>	-/bin/rm -f CBFlib.shar*
>	$(SHAR) -p -o CBFlib.shar -n CBFlib.shar -M \
>	 $(DOCUMENTS) $(SOURCE) $(SRC)/cbf.stx $(HEADERS) \
>          $(EXAMPLES)/img.c \
>	$(EXAMPLES)/img.h \
>	 $(EXAMPLES)/makecbf.c $(EXAMPLES)/img2cif.c $(EXAMPLES)/cif2cbf.c \
>	 $(EXAMPLES)/convert_image.c \
>	 $(EXAMPLES)/template_adscquantum4_2304x2304.cbf \
>	 $(EXAMPLES)/template_mar345_2300x2300.cbf \
>	 README.html README Makefile \
>	 $(JPEGS) 9ins.cif.gz
>	mv CBFlib.shar.01 CBFlib.shar
>	compress CBFlib.shar
>
>#
># Create a Tape Archive for distribution
>#
>
>tar:   $(DOCUMENTS) $(SOURCE) $(SRC)/cbf.stx $(HEADERS) \
>          $(EXAMPLES)/img.c \
>	 $(EXAMPLES)/img.h \
>	 $(EXAMPLES)/makecbf.c $(EXAMPLES)/img2cif.c $(EXAMPLES)/cif2cbf.c \
>	 $(EXAMPLES)/convert_image.c $(EXAMPLES)/testcell.C \
>	 $(EXAMPLES)/testreals.c \
>	 $(EXAMPLES)/testflat.c \
>	 $(EXAMPLES)/testflatpacked.c \
>	$(EXAMPLES)/template_adscquantum4_2304x2304.cbf \
>	 $(EXAMPLES)/template_mar345_2300x2300.cbf \
>	 $(EXAMPLES)/template_adscquantum315_3072x3072.cbf \
>	 README.html README Makefile \
>	 $(JPEGS) 9ins.cif.gz testcell.dat testcell_orig.prt \
>	 converted_orig.cbf adscconverted_original.cbf
>	-/bin/rm -f CBFlib.tar*
>	tar cvBf CBFlib.tar \
>	 $(DOCUMENTS) $(SOURCE) $(SRC)/cbf.stx $(HEADERS) \
>          $(EXAMPLES)/img.c \
>	$(EXAMPLES)/img.h \
>	 $(EXAMPLES)/makecbf.c $(EXAMPLES)/img2cif.c $(EXAMPLES)/cif2cbf.c \
>	 $(EXAMPLES)/convert_image.c $(EXAMPLES)/testcell.C 
>$(EXAMPLES)/testreals.c \
>	 $(EXAMPLES)/template_adscquantum4_2304x2304.cbf \
>	 $(EXAMPLES)/template_mar345_2300x2300.cbf \
>	 README.html README Makefile \
>	 $(JPEGS) 9ins.cif.gz testcell.dat testcell_orig.prt \
>	 converted_orig.cbf \
>	 adscconverted_original.cbf
>	 gzip --best CBFlib.tar
>
>
>/*  Modified by JPW... it was opening the return of mktemp, which is
>  *  not what you want...
>  *
>  *
>  * $OpenLDAP: /libraries/liblutil/utils.c,v 1.30 2005/11/24 00:10:06 
>ando Exp $
>  * This work is part of OpenLDAP Software <http://www.openldap.org/>.
>  *
>  * Copyright 1998-2005 The OpenLDAP Foundation.
>  * All rights reserved.
>  *
>  * Redistribution and use in source and binary forms, with or without
>  * modification, are permitted only as authorized by the OpenLDAP
>  * Public License.
>  *
>  * A copy of this license is available in the file LICENSE in the
>  * top-level directory of the distribution or, alternatively, at
>  * <http://www.OpenLDAP.org/license.html>.
>  */
>
>#ifdef __MINGW32__
>#include <stdio.h>
>#include <stdlib.h>
>#include <fcntl.h>
>
>int mkstemp( char * templatename )
>{
>     /* creates the template name overwriting templatename */
>     mktemp ( templatename ) ;
>     return open ( templatename, O_RDWR|O_CREAT|O_EXCL, 0600 );
>}
>#endif
>
>
>
>
>_______________________________________________
>imgcif-l mailing list
>imgcif-l@iucr.org
>http://scripts.iucr.org/mailman/listinfo/imgcif-l


-- 
=====================================================
  Herbert J. Bernstein, Professor of Computer Science
    Dowling College, Kramer Science Center, KSC 121
         Idle Hour Blvd, Oakdale, NY, 11769

                  +1-631-244-3035
                  yaya@dowling.edu
=====================================================
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Scientific Union Member of the International Science Council (admitted 1947). Member of CODATA, the ISC Committee on Data. Partner with UNESCO, the United Nations Educational, Scientific and Cultural Organization in the International Year of Crystallography 2014.

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