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Re: [dddwg] To contribute to Open Science using Zenodo I foundquite straightforward
- To: "Coles S.J." <S.J.Coles@soton.ac.uk>
- Subject: Re: [dddwg] To contribute to Open Science using Zenodo I foundquite straightforward
- From: Andrew Goetz <andy.gotz@esrf.fr>
- Date: Tue, 27 Sep 2016 16:42:01 +0200
- Cc: dddwg@iucr.org
- In-Reply-To: <9DEEE21A-CAE5-431C-8540-F8579B8D4B31@soton.ac.uk>
- References: <5FDAAB132A30B7469258444FB7BD4C9101C3142543@MBXP07.ds.man.ac.uk><9DEEE21A-CAE5-431C-8540-F8579B8D4B31@soton.ac.uk>
Simon, why not pack the files into and hdf5 container ? That is what we are planning to do for archiving files. Andy On 27.09.2016 16:27, Coles S.J. wrote:> John,> > This is very good to hear!> > I personally have an example where I wish to make the images available> for a data collection associated with a remarkable structure we are> going to submit to an IUCr journal quite soon. The primary reason I> want to make the raw data available is so that others can take them> and ‘have a go themselves’ to see if they can come up with a different> / better model.> > All fine – but I note you uploaded individual images? Or did Zenodo> unpack a zipfile? I don’t want to go through the effort of uploading> 300 individual files – and I’m absolutely sure nobody wants to go> through the effort of downloading 300 individual files to reprocess> and reuse the dataset! Is there a reason for this - why not bundle> them together in a package of some sort (Zip too big)? Or am I missing> something?> > Thanks!> Simon.> > Simon Coles FRSC, SFHEA.> Professor of Structural Chemistry.> Director, UK National Crystallography Service.> Chemistry, Faculty of Natural and Environmental Sciences,> University of Southampton.> Southampton, SO17 1BJ. UK.> +44(0)2380596721> Staff Page: http://www.soton.ac.uk/chemistry/about/staff/sjc5.page> NCS: http://www.ncs.ac.uk | Southampton Diffraction Centre:> http://www.soton.ac.uk/sdc> ResearcherID: http://www.researcherid.com/rid/A-1795-2009 | ORCID:> http://orcid.org/0000-0001-8414-9272> > > From: dddwg <dddwg-bounces@iucr.org> on behalf of> "john.helliwell@manchester.ac.uk" <john.helliwell@manchester.ac.uk>> Date: Tuesday, 27 September 2016 at 14:48> To: "dddwg@iucr.org" <dddwg@iucr.org>> Subject: [dddwg] To contribute to Open Science using Zenodo I found> quite straightforward> > Dear Colleagues,> I imagine that it will be of general interest that to contribute to> "OpenScience" harnessing Zenodo is quite straightforward ie:- preprint> and raw data uploaded and assigned dois on Sept 24th 2016 and then for> good measure announced on my twitter account @HelliwellJohn on Sept> 25th 2016:-> > #OpenScience Our atomic resolution cisplatin lysozyme study; the dois> are here:- http://doi.org/10.5281/zenodo.155068> http://doi.org/10.5281/zenodo.154704> > The PDB code (5LXW) is cited in the preprint at the first Zenodo doi> above. My instruction to PDB to release the entry 5LXW I made on Sept> 25th 2016.> > Greetings,> John> > Emeritus Prof of Chemistry John R Helliwell DSc_Physics> Perspectives in> Crystallography<https://outlook.manchester.ac.uk/owa/redir.aspx?SURL=JLjRW0_uSO2uCWXoeK-_YEiBuCJ_wkHJ5QxVDbIIAj0l57JRLfrSCGgAdAB0AHAAcwA6AC8ALwB3AHcAdwAuAGMAcgBjAHAAcgBlAHMAcwAuAGMAbwBtAC8AUABlAHIAcwBwAGUAYwB0AGkAdgBlAHMALQBpAG4ALQBDAHIAeQBzAHQAYQBsAGwAbwBnAHIAYQBwAGgAeQAvAEgAZQBsAGwAaQB3AGUAbABsAC8AOQA3ADgAMQA0ADkAOAA3ADMAMgAxADAAOQA.&URL=https%3a%2f%2fwww.crcpress.com%2fPerspectives-in-Crystallography%2fHelliwell%2f9781498732109>> > Skills for a Scientific> Life<https://www.crcpress.com/Skills-for-a-Scientific-Life/Helliwell/p/book/9781498768757>> _______________________________________________> dddwg mailing list> dddwg@iucr.org> http://mailman.iucr.org/cgi-bin/mailman/listinfo/dddwg_______________________________________________dddwg mailing listdddwg@iucr.orghttp://mailman.iucr.org/cgi-bin/mailman/listinfo/dddwg
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