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Re: [dddwg] To contribute to Open Science using Zenodo I foundquite straightforward
- To: "Coles S.J." <S.J.Coles@soton.ac.uk>, "dddwg@iucr.org" <dddwg@iucr.org>
- Subject: Re: [dddwg] To contribute to Open Science using Zenodo I foundquite straightforward
- From: John Helliwell <john.helliwell@manchester.ac.uk>
- Date: Tue, 27 Sep 2016 14:43:14 +0000
- In-Reply-To: <9DEEE21A-CAE5-431C-8540-F8579B8D4B31@soton.ac.uk>
- References: <5FDAAB132A30B7469258444FB7BD4C9101C3142543@MBXP07.ds.man.ac.uk>,<9DEEE21A-CAE5-431C-8540-F8579B8D4B31@soton.ac.uk>
Dear Simon,It was quite straightforward for me to upload the highlighted individual raw images into Zenodo from my folder on my laptop. I imagine that downloading would be an equivalent 'highlight the file names' process. [Maybe I am wrong!] As to motivation:-What you mention would be one such motivation.For the one I just emailed about the medical theme of the platins has a wide interest and so, a bit like zika, sharing of analysed results early on I imagine as useful to the wider community. Greetings,John Emeritus Prof of Chemistry John R Helliwell DSc_PhysicsPerspectives in Crystallography Skills for a Scientific Life ________________________________________From: Coles S.J. [S.J.Coles@soton.ac.uk]Sent: 27 September 2016 15:27To: John Helliwell; dddwg@iucr.orgSubject: Re: [dddwg] To contribute to Open Science using Zenodo I found quite straightforward John, This is very good to hear! I personally have an example where I wish to make the images available for a data collection associated with a remarkable structure we are going to submit to an IUCr journal quite soon. The primary reason I want to make the raw data available is so that others can take them and ‘have a go themselves’ to see if they can come up with a different / better model. All fine – but I note you uploaded individual images? Or did Zenodo unpack a zipfile? I don’t want to go through the effort of uploading 300 individual files – and I’m absolutely sure nobody wants to go through the effort of downloading 300 individual files to reprocess and reuse the dataset! Is there a reason for this - why not bundle them together in a package of some sort (Zip too big)? Or am I missing something? Thanks!Simon. Simon Coles FRSC, SFHEA.Professor of Structural Chemistry.Director, UK National Crystallography Service.Chemistry, Faculty of Natural and Environmental Sciences,University of Southampton.Southampton, SO17 1BJ. UK.+44(0)2380596721Staff Page: http://www.soton.ac.uk/chemistry/about/staff/sjc5.pageNCS: http://www.ncs.ac.uk | Southampton Diffraction Centre: http://www.soton.ac.uk/sdcResearcherID: http://www.researcherid.com/rid/A-1795-2009 | ORCID: http://orcid.org/0000-0001-8414-9272 From: dddwg <dddwg-bounces@iucr.org> on behalf of "john.helliwell@manchester.ac.uk" <john.helliwell@manchester.ac.uk>Date: Tuesday, 27 September 2016 at 14:48To: "dddwg@iucr.org" <dddwg@iucr.org>Subject: [dddwg] To contribute to Open Science using Zenodo I found quite straightforward Dear Colleagues,I imagine that it will be of general interest that to contribute to "OpenScience" harnessing Zenodo is quite straightforward ie:- preprint and raw data uploaded and assigned dois on Sept 24th 2016 and then for good measure announced on my twitter account @HelliwellJohn on Sept 25th 2016:- #OpenScience Our atomic resolution cisplatin lysozyme study; the dois are here:- http://doi.org/10.5281/zenodo.155068 http://doi.org/10.5281/zenodo.154704 The PDB code (5LXW) is cited in the preprint at the first Zenodo doi above. My instruction to PDB to release the entry 5LXW I made on Sept 25th 2016. Greetings,John Emeritus Prof of Chemistry John R Helliwell DSc_PhysicsPerspectives in Crystallography<https://outlook.manchester.ac.uk/owa/redir.aspx?SURL=JLjRW0_uSO2uCWXoeK-_YEiBuCJ_wkHJ5QxVDbIIAj0l57JRLfrSCGgAdAB0AHAAcwA6AC8ALwB3AHcAdwAuAGMAcgBjAHAAcgBlAHMAcwAuAGMAbwBtAC8AUABlAHIAcwBwAGUAYwB0AGkAdgBlAHMALQBpAG4ALQBDAHIAeQBzAHQAYQBsAGwAbwBnAHIAYQBwAGgAeQAvAEgAZQBsAGwAaQB3AGUAbABsAC8AOQA3ADgAMQA0ADkAOAA3ADMAMgAxADAAOQA.&URL=https%3a%2f%2fwww.crcpress.com%2fPerspectives-in-Crystallography%2fHelliwell%2f9781498732109> Skills for a Scientific Life<https://www.crcpress.com/Skills-for-a-Scientific-Life/Helliwell/p/book/9781498768757>_______________________________________________dddwg mailing listdddwg@iucr.orghttp://mailman.iucr.org/cgi-bin/mailman/listinfo/dddwg
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