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Re: Whitespace in atom labels?
- Subject: Re: Whitespace in atom labels?
- From: James H via cif-developers <cif-developers@xxxxxxxx>
- Date: Fri, 8 Oct 2021 17:07:13 +1100
- Cc: James H <jamesrhester@xxxxxxxxx>
- In-Reply-To: <5856934.F1sESvdC26@graphite>
- References: <CAM+dB2eMGMTCLF7MqFhLmSDqQ1veYh4FUqNWOrz8TPHvpOgRTw@mail.gmail.com><4792876.nE7nZvSgPR@graphite> <ad70bbe9-ac4e-65a7-0568-2f187f23cbd8@iucr.org><5856934.F1sESvdC26@graphite>
OK, it looks like there are no objections, I will proceed with the fix for the DDLm dictionaries.
On Tue, 28 Sept 2021 at 00:58, Mike Hoyland via cif-developers <cif-developers@iucr.org> wrote:
On Monday, 27 September 2021 14:00:41 BST Brian McMahon via cif-developers
wrote:
> So long as we're confident that there are no instances with embedded
> white space in the public archives, I would agree to this.
I will run a full check on our archives to check for any such labels.
Mike
===================================================================
>
> Brian
>
> On 27/09/2021 13:20, Mike Hoyland via cif-developers wrote:
> > Very happy to support this.
> >
> > On Friday, 24 September 2021 01:56:43 BST James H via cif-developers
wrote:
> >> Hello cif-developers,
> >>
> >> Atom labels as defined in the DDL1 core dictionary are, strictly
> >> speaking,
> >> allowed to contain whitespace, because the machine-readable parts of DDL1
> >> do not allow this to be expressed, and the text definition doesn't
> >> explicitly exclude it. mmCIF can and has explicitly restricted atom
> >> labels
> >> to not include whitespace in a machine-readable way, so our preference
> >> would be to follow suit. We are therefore contemplating (see
> >> https://github.com/COMCIFS/cif_core/pull/249) restricting atom labels to
> >> not contain whitespace. As far as I know there are no such entries in
> >> COD,
> >> but I thought it worth checking with this group first. Any objections?
> >>
> >> thanks,
> >> James.
>
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With best wishes,
Mike Hoyland
Systems Developer
IUCr, Chester
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