ISTable

Description

The ISTable package is a collection of classes for managing table objects. This class provides the foundation for many PDB applications which parse, search and manage mmCIF data and dictionaries. This class uses an improved indexing scheme relative to its predecessor class SSTABLE. The package is also known as CIFTable.

Distribution

• current version (RCSB web site)

If you wish to install and use this software you should download the most up-to-date version from the above Web site. The links below are to copies which are suitable for browsing or for use if the primary Web site is not available. However, they may be out of date and lack the full functionality of the latest version.

• stable source for Unix: Unix gzipped tar file cif-table-obj-v8.011-prod-src.tar.gz
• individual source files

Status

ISTable is distributed from the Rutgers site of the Research Collaboratory for Structural Bioinformatics (RCSB) and forms an important component of the software systems used in the Protein Data Bank. Comments should be directed to jwest@rcsb.rutgers.edu.

Language and platform

The software is written in C++ and should run on versions of Unix with suitable C++ compilers.

Documentation

• Installation: For Unix-type installations, copy the gzipped tar file cif-table-obj-v8.011-prod-src.tar.gz into an empty directory; ungzip and extract files using the Unix tar utility. Build the application using the make utility; run the test program with 'make test':

   cp cif-table-obj-v8.011-prod-src.tar.gz /g/h/i; cd /g/h/i
   gunzip cif-table-obj-v8.011-prod-src.tar.gz; tar xvf cif-table-obj-v8.011-prod-src.tar
   cd cif-table-obj-v8.011-prod-src
   make
   make test 

  If gzip or tar are unavailable, individual source files may be saved to the build directory.
  For more details see the Installation Notes
• Documentation
• Usage examples
  

Other versions

• cif-table-obj-v8.003-prod-src.tar.gz
• cif-table-obj-v7.022-prod-src.tar.gz
• cif-table-obj-v6.201-prod-src.tar.gz

Terms and conditions of use

Copyright in the software © Rutgers - The State University of New Jersey
Authors: Olivera Tosic and John Westbrook

The software is distributed here under licence from the Protein Data Bank/RCSB. Use of the software is governed by the PDB software licence. Queries concerning any other use should be directed to sw-help@rcsb.rutgers.edu.