Protein Data Bank exchange dictionary (pdbx) version 1.0521

Category PDBX_CONSTRUCT_FEATURE

Name:
'pdbx_construct_feature'

Description:

   Data items in the PDBX_CONSTRUCT_FEATURE category may be used to
  specify various properties of a nucleic acid sequence used during
  protein production.

Example:

Example 1 - vector pUC28

 
        loop_
        _pdbx_construct_feature.id
        _pdbx_construct_feature.entry_id
        _pdbx_construct_feature.construct_id
        _pdbx_construct_feature.start_seq
        _pdbx_construct_feature.end_seq
        _pdbx_construct_feature.type
        _pdbx_construct_feature.details
  1  111000111   1 . . .
     "pKK84-1 ClaI 5260bp 5247..5247 ptac11 TaqI-TaqI 192bp, -35 trp promoter -> pEA300 5452bp"
  2  111000111   1 . . .
     "pKK84-1 1..5246 5246bp ClaI = AT^CGAT TaqI =  T^CGA cgact..."
  3  111000111   1 5247  5436 .
     "ptac11 190bp ...cat TaqI =  T^CGA ClaI = AT^CGAT"
  4  111000111   1 5437  5450  .
     "pKK84-1 5247..5260 14bp"
  5  111000111   1 . . misc_binding
     "SIT unique EcoRI-ClaI-HindIII-BamHI-PvuII"
  6  111000111   1 . .   rep_origin
     "ORI E. coli pMB1 (ColE1 and pBR322)"
  7  111000111   1 . .  promoter
     "PRO E. coli trp"
  8  111000111   1 . . CDS
     "ANT E. coli beta-lactamase gene (bla) ampicillin resistance gene (apr/amp)"

Category groups:
    inclusive_group
    entity_group
    protein_production_group
    pdbx_group
Category keys:
    _pdbx_construct_feature.construct_id
    _pdbx_construct_feature.id

Mandatory category: no

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Crystallographic Information Framework

Protein Data Bank exchange dictionary (pdbx) version 1.0521

Category PDBX_CONSTRUCT_FEATURE

International Tables for Crystallography

Volume G: Definition and exchange of crystallographic data

Edited by S. R. Hall and B. McMahon

IUCrData