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Modulated structures dictionary (msCIF) version 3.2.1
Category ATOM_SITE_ROT_SPECIAL_FUNC
Name:'ATOM_SITE_ROT_SPECIAL_FUNC'
Parent category:
MS_GROUP
Definition:
Data items in the ATOM_SITE_ROT_SPECIAL_FUNC category record details about the rotational part of the displacive modulation of a rigid group in a modulated structure when it is not described by Fourier series. Special functions are effective in some cases where the modulations are highly anharmonic, since the number of parameters is drastically reduced. However, they are in general discontinuous or with discontinuous derivatives and therefore these functions describe an ideal situation that never occurs in a real modulated crystal. Up to now, only a few types of special functions have been used and all of them come from the JANA2006 suite of programs (Petricek, Dusek & Palatinus, 2014). Although this approach is far from being general, it has the advantage that the functions are tightly defined and therefore the atomic displacements and occupations can be calculated easily. In this dictionary, only the special functions available in JANA2006 have been included. These are: (1) Sawtooth functions for the displacive modulation of atoms and rigid groups. (2) Zig-Zag functions for the displacive modulation of atoms and rigid groups. (3) Crenel functions for the occupational modulation of atoms and rigid groups. Both of these only apply to one-dimensional modulated structures. References: Petricek, V., Dusek, M. & Palatinus, L. (2014). Z. Kristallogr. 229(5), 345-352. DOI 10.1515/zkri-2014-1737 Crystallographic Computing System JANA2006: General features Petricek, V., Eigner, V., Dusek, M. & Cejchan, A. (2016). Z. Kristallogr. 231(5), 301-312. DOI 10.1515/zkri-2015-1913 Discontinuous modulation functions and their application for analysis of modulated structures with the computing system JANA2006
Category is of type Loop
Category key:_atom_site_rot_special_func.atom_site_label
This category contains the following items
- _atom_site_rot_special_func.atom_site_label
- _atom_site_rot_special_func.matrix_seq_id
- _atom_site_rot_special_func.sawtooth
- _atom_site_rot_special_func.sawtooth_ax
- _atom_site_rot_special_func.sawtooth_axyz
- _atom_site_rot_special_func.sawtooth_ay
- _atom_site_rot_special_func.sawtooth_az
- _atom_site_rot_special_func.sawtooth_c
- _atom_site_rot_special_func.sawtooth_w
- _atom_site_rot_special_func.zigzag
- _atom_site_rot_special_func.zigzag_axyz
- _atom_site_rot_special_func.zigzag_c
- _atom_site_rot_special_func.zigzag_w