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ATOM_SITE_FOURIER_WAVE_VECTOR
CIF
Data items in the ATOM_SITE_FOURIER_WAVE_VECTOR category record details about the wave vectors of the Fourier terms used in the structural model. This category is fully defined in the modulated structures dictionary.
Examples:
loop_ _cell_wave_vector_seq_id _cell_wave_vector_x _cell_wave_vector_y _cell_wave_vector_z 1 0.30000 0.30000 0.00000 2 -0.60000 0.30000 0.00000 loop_ _atom_site_Fourier_wave_vector_seq_id _atom_site_Fourier_wave_vector_x _atom_site_Fourier_wave_vector_y _atom_site_Fourier_wave_vector_z _atom_site_Fourier_wave_vector_q_coeff 1 -0.30000 0.60000 0.00000 [1 1] 2 -0.60000 0.30000 0.00000 [0 1] 3 -0.30000 -0.30000 0.00000 [-1 0]
loop_ _cell_wave_vector_seq_id _cell_wave_vector_x _cell_wave_vector_y _cell_wave_vector_z 1 0.30000 0.30000 0.00000 2 -0.60000 0.30000 0.00000 loop_ _atom_site_Fourier_wave_vector_seq_id _atom_site_Fourier_wave_vector_x _atom_site_Fourier_wave_vector_y _atom_site_Fourier_wave_vector_z _atom_site_Fourier_wave_vector_q1_coeff _atom_site_Fourier_wave_vector_q2_coeff 1 -0.30000 0.60000 0.00000 1 1 2 -0.60000 0.30000 0.00000 0 1 3 -0.30000 -0.30000 0.00000 -1 0
_atom_site_Fourier_wave_vector.q1_coeff
CIF
For a given incommensurate modulation that contributes to the structure, the wave vector of the modulation can be expressed as an integer linear combination of the d independent wave vectors that define the (3+d)-dimensional superspace. The q1_coeff tag holds the integer coefficient of the contribution of the first independent wave vector, the q2_coeff tag holds the integer coefficient of the contribution of the second independent wave vector, and so on. At the time of this writing, no examples with more than three independent wave vectors are known, though there is no theoretical limit to the number that could occur. These tags are not explicitly magnetic; they are equally applicable to any incommensurate modulation.
_atom_site_Fourier_wave_vector.q2_coeff
CIF
For a given incommensurate modulation that contributes to the structure, the wave vector of the modulation can be expressed as an integer linear combination of the d independent wave vectors that define the (3+d)-dimensional superspace. The q1_coeff tag holds the integer coefficient of the contribution of the first independent wave vector, the q2_coeff tag holds the integer coefficient of the contribution of the second independent wave vector, and so on. At the time of this writing, no examples with more than three independent wave vectors are known, though there is no theoretical limit to the number that could occur. These tags are not explicitly magnetic; they are equally applicable to any incommensurate modulation.
_atom_site_Fourier_wave_vector.q3_coeff
CIF
For a given incommensurate modulation that contributes to the structure, the wave vector of the modulation can be expressed as an integer linear combination of the d independent wave vectors that define the (3+d)-dimensional superspace. The q1_coeff tag holds the integer coefficient of the contribution of the first independent wave vector, the q2_coeff tag holds the integer coefficient of the contribution of the second independent wave vector, and so on. At the time of this writing, no examples with more than three independent wave vectors are known, though there is no theoretical limit to the number that could occur. These tags are not explicitly magnetic; they are equally applicable to any incommensurate modulation.
_atom_site_Fourier_wave_vector.q_coeff
CIF
For a given incommensurate modulation that contributes to the structure, the wave vector of the modulation can be expressed as an integer linear combination of the d independent wave vectors that define the (3+d)-dimensional superspace. This tag holds each of the integer coefficients as an array. At the time of this writing, no examples with more than three independent wave vectors are known, though there is no theoretical limit to the number that could occur. These tags are not explicitly magnetic; they are equally applicable to any incommensurate modulation.
ATOM_SITE_MOMENT
CIF
This category provides a loop for presenting the magnetic moments of atoms in one of several coordinate systems. This is a child category of the ATOM_SITE category, so that the magnetic moments can either be listed alongside the non-magnetic atom properties in the main ATOM_SITE loop, or be listed in a separate loop.
_atom_site_moment.Cartn
CIF
The atom-site magnetic moment vector specified according to a set of orthogonal Cartesian axes where x||a and z||c* with y completing a right-hand set.
_atom_site_moment.Cartn_x
CIF
The x component of the atom-site magnetic moment vector
(see _atom_site_moment.Cartn).
_atom_site_moment.Cartn_y
CIF
The y component of the atom-site magnetic moment vector
(see _atom_site_moment.Cartn).
_atom_site_moment.Cartn_z
CIF
The z component of the atom-site magnetic moment vector
(see _atom_site_moment.Cartn).
_atom_site_moment.crystalaxis
CIF
The atom-site magnetic moment vector specified using components parallel to each of the unit cell axes. This is the recommended coordinate system for most magnetic structures.
_atom_site_moment.crystalaxis_x
CIF
The component of the atom-site magnetic-moment vector parallel to the first
unit-cell axis. See _atom_site_moment.crystalaxis.
_atom_site_moment.crystalaxis_y
CIF
The component of the atom-site magnetic-moment vector parallel to the second
unit-cell axis. See _atom_site_moment.crystalaxis.
_atom_site_moment.crystalaxis_z
CIF
The component of the atom-site magnetic-moment vector parallel to the third
unit-cell axis. See _atom_site_moment.crystalaxis.
_atom_site_moment.label
CIF
This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.
_atom_site_moment.magnitude
CIF
The magnitude of a magnetic moment vector.
_atom_site_moment.modulation_flag
CIF
A code that signals whether the structural model includes the modulation of the magnetic moment of a given atom site.
_atom_site_moment.refinement_flags_magnetic
CIF
The constraints/restraints placed on the magnetic moment during model refinement.
_atom_site_moment.spherical_azimuthal
CIF
The azimuthal angle of the atom-site magnetic moment vector specified in spherical coordinates relative to a set of orthogonal Cartesian axes where x||a and z||c* with y completing a right-hand set. The azimuthal angle is a right-handed rotation around the +z axis starting from the +x side of the x-z plane.
_atom_site_moment.spherical_modulus
CIF
The modulus of the atom-site magnetic moment vector specified in spherical coordinates relative to a set of orthogonal Cartesian axes where x||a and z||c* with y completing a right-hand set.
_atom_site_moment.spherical_polar
CIF
The polar angle of the atom-site magnetic moment vector specified in spherical coordinates relative to a set of orthogonal Cartesian axes where x||a and z||c* with y completing a right-hand set. The polar angle is measured relative to the +z axis.
_atom_site_moment.symmform
CIF
A symbolic expression that indicates the symmetry-restricted form of the components of the magnetic moment vector of the atom. Unlike the positional coordinates of an atom, its magnetic moment has no translational component to be represented.
Examples:
mx,my,mz
mx,-mx,0
mx,0,mz
ATOM_SITE_MOMENT_FOURIER
CIF
Data items in the ATOM_SITE_MOMENT_FOURIER category record details about the Fourier components of the magnetic modulation of an atom site in a modulated structure. The (in general complex) coefficients of each Fourier component belong to the child category ATOM_SITE_MOMENT_FOURIER_PARAM, which may be listed separately.
_atom_site_moment_Fourier.atom_site_label
CIF
This string uniquely identifies the atom for which the Fourier modulation components are to be specified. The Fourier modulation components are always presented in a separate loop (not in the ATOM_SITE loop). This string must match an _atom_site.label from the ATOM_SITE loop, and otherwise conform to the rules for _atom_site_label.
_atom_site_moment_Fourier.axis
CIF
Specifies the coordinate system in which the Fourier modulation components are to be presented and an axis in that coordinate system.
Analogous tags: msCIF:_atom_site_displace_Fourier.axis, msCIF:_atom_site_rot_Fourier.axis, msCIF:_atom_site_U_Fourier.tens_elem
_atom_site_moment_Fourier.id
CIF
An arbitrary code that uniquely identifies each of the components of each of the magnetic Fourier modulations of each of the atoms in the structure. It will typically include an atom name, a wave-vector id, and a coordinate axis. A sequence of positive integers could also be used.
Examples:
K2_1_z
Se1_2_x
_atom_site_moment_Fourier.wave_vector_seq_id
CIF
An arbitrary code that uniquely identifies the wave vector for which magnetic Fourier modulation components are to be described within the ATOM_SITE_MOMENT_FOURIER loop. It must match one of the _atom_site_Fourier_wave_vector.seq_id values in the ATOM_SITE_FOURIER_WAVE_VECTOR loop.
Analogous tags: msCIF:_atom_site_displace_Fourier_wave_vector.seq_id, msCIF:_atom_site_rot_Fourier_wave_vector.seq_id, msCIF:_atom_site_occ_Fourier_wave_vector.seq_id, msCIF:_atom_site_U_Fourier_wave_vector.seq_id
ATOM_SITE_MOMENT_FOURIER_PARAM
CIF
Data items in this category record details about the coefficients of the Fourier series used to describe the magnetic modulation of an atom. This is a child category of the ATOM_SITE_MOMENT_FOURIER category; so that magnetic Fourier components can either be listed within the ATOM_SITE_MOMENT_FOURIER loop, or else listed in a separate loop.
Analogous tags: _atom_site_displace_Fourier_param.*, _atom_site_rot_Fourier_param.*, _atom_site_occ_Fourier_param.*, _atom_site_U_Fourier_param.*
Example:
loop_ _cell_wave_vector_seq_id _cell_wave_vector_x _cell_wave_vector_y _cell_wave_vector_z 1 0.30000 0.30000 0.00000 2 -0.60000 0.30000 0.00000 loop_ _atom_site_Fourier_wave_vector_seq_id _atom_site_Fourier_wave_vector_x _atom_site_Fourier_wave_vector_y _atom_site_Fourier_wave_vector_z _atom_site_Fourier_wave_vector_q1_coeff _atom_site_Fourier_wave_vector_q2_coeff 1 -0.30000 0.60000 0.00000 1 1 2 -0.60000 0.30000 0.00000 0 1 3 -0.30000 -0.30000 0.00000 -1 0 loop_ _atom_site_moment_Fourier.id _atom_site_moment_Fourier.atom_site_label _atom_site_moment_Fourier.wave_vector_seq_id _atom_site_moment_Fourier.axis _atom_site_moment_Fourier_param.cos _atom_site_moment_Fourier_param.sin _atom_site_moment_Fourier_param.cos_symmform _atom_site_moment_Fourier_param.sin_symmform 1 Fe_1 1 x 0.00000 0.84852 0 mxs 2 Fe_1 1 y 0.00000 0.42426 0 0.50000*mxs 3 Fe_1 1 z 0.00000 0.00000 0 0 4 Fe_1 2 x 0.00000 -0.42426 0 -0.50000*mxs 5 Fe_1 2 y 0.00000 -0.84852 0 -mxs 6 Fe_1 2 z 0.00000 0.00000 0 0 7 Fe_1 3 x -0.42426 0.00000 -0.50000*mxs 0 8 Fe_1 3 y 0.42426 0.00000 0.50000*mxs 0 9 Fe_1 3 z 0.00000 0.00000 0 0
_atom_site_moment_Fourier_param.cos
CIF
The cosine component of the magnetic Fourier modulation of a specific atom, wave vector and coordinate axis. It is always used together with the sine component, but not with the modulus or phase components.
Analogous tags: msCIF:_atom_site_displace_Fourier_param.cos, msCIF:_atom_site_rot_Fourier_param.cos, msCIF:_atom_site_occ_Fourier_param.cos, msCIF:_atom_site_U_Fourier_param.cos Also see the technical descriptions of the analogous tags.
_atom_site_moment_Fourier_param.cos_symmform
CIF
A symbolic expression that indicates the symmetry-restricted form of this modulation component for the affected Wyckoff site. The expression can include a zero, a symbol, or a symbol multiplied ('*') by a numerical prefactor. An allowed symbol is a string that contains the following parts. (1) The 1st character is "m" for magnetic. (2) The 2nd character is one of "x", "y", or "z", to indicate the magnetic component to be modulated. (3) The 3rd character is one of "m" for modulus, "p" for phase, "c" for cosine, or "s" for sine. (4) The 4th character is an integer that indicates the modulation vector. To use the same symbol with modulation components belonging to symmetry related axes and/or wave vectors, is to point out symmetry relationships amongst them. Obviously, modulation components belonging to symmetry-distinct atoms, axes, or wave vectors cannot be related by symmetry.
Analogous tags: none, though analogous tags are needed for displace, occ, U, and aniso waves.
Example:
loop_ _cell_wave_vector_seq_id _cell_wave_vector_x _cell_wave_vector_y _cell_wave_vector_z 1 0.30000 0.30000 0.00000 2 -0.60000 0.30000 0.00000 loop_ _atom_site_Fourier_wave_vector_seq_id _atom_site_Fourier_wave_vector_x _atom_site_Fourier_wave_vector_y _atom_site_Fourier_wave_vector_z _atom_site_Fourier_wave_vector_q1_coeff _atom_site_Fourier_wave_vector_q2_coeff 1 -0.30000 0.60000 0.00000 1 1 2 -0.60000 0.30000 0.00000 0 1 3 -0.30000 -0.30000 0.00000 -1 0 loop_ _atom_site_moment_Fourier_id _atom_site_moment_Fourier_atom_site_label _atom_site_moment_Fourier_wave_vector_seq_id _atom_site_moment_Fourier_axis _atom_site_moment_Fourier_param.cos _atom_site_moment_Fourier_param.sin _atom_site_moment_Fourier_param.cos_symmform _atom_site_moment_Fourier_param.sin_symmform 1 Fe_1 1 x 0.00000 0.84852 0 mxs1 2 Fe_1 1 y 0.00000 0.42426 0 0.50000*mxs1 3 Fe_1 1 z 0.00000 0.00000 0 0 4 Fe_1 2 x 0.00000 -0.42426 0 -0.50000*mxs1 5 Fe_1 2 y 0.00000 -0.84852 0 -mxs1 6 Fe_1 2 z 0.00000 0.00000 0 0 7 Fe_1 3 x -0.42426 0.00000 -0.50000*mxs1 0 8 Fe_1 3 y 0.42426 0.00000 0.50000*mxs1 0 9 Fe_1 3 z 0.00000 0.00000 0 0
_atom_site_moment_Fourier_param.id
CIF
An arbitrary code that uniquely identifies each of the components
of each of the magnetic Fourier modulations of each of the atoms
in the structure. It will typically include an atom name, a
wave-vector id, and a coordinate axis. A sequence of positive
integers could also be used. This tag is only used when the
magnetic Fourier modulation components are split off into a
separate loop, which is less typical. When used, its value must
match one of the _atom_site_moment_Fourier.id values in the
ATOM_SITE_MOMENT_FOURIER loop.
_atom_site_moment_Fourier_param.modulus
CIF
The modulus component of the magnetic Fourier modulation of a specific atom, wave vector and coordinate axis. It is always used together with the phase component, but not with the cosine or sine components.
Analogous tags: msCIF:_atom_site_displace_Fourier_param.modulus, msCIF:_atom_site_rot_Fourier_param.modulus, msCIF:_atom_site_occ_Fourier_param.modulus, msCIF:_atom_site_U_Fourier_param.modulus Also see the technical descriptions of the analogous tags.
_atom_site_moment_Fourier_param.modulus_symmform
CIF
See the description and example given for the
_atom_site_moment_Fourier_param.cos_symmform item.
_atom_site_moment_Fourier_param.phase
CIF
The phase component of the magnetic Fourier modulation of a specific atom, wave vector and coordinate axis. It is always used together with the modulus component, but not with the cosine or sine components. This parameter will be unitless regardless of the coordinate system used.
Analogous tags: msCIF:_atom_site_displacive_Fourier_param.phase, msCIF:_atom_site_rot_Fourier_param.phase, msCIF:_atom_site_occ_Fourier_param.phase, msCIF:_atom_site_U_Fourier_param.phase Also see the technical descriptions of the analogous tags.
_atom_site_moment_Fourier_param.phase_symmform
CIF
See the description and example given for the
_atom_site_moment_Fourier_param.cos_symmform item.
_atom_site_moment_Fourier_param.sin
CIF
The sine component of the magnetic Fourier modulation of a specific atom, wave vector and coordinate axis. It is always used together with the cosine component, but not with the modulus or phase components.
Analogous tags: msCIF:_atom_site_displace_Fourier_param.sin, msCIF:_atom_site_rot_Fourier_param.sin, msCIF:_atom_site_occ_Fourier_param.sin, msCIF:_atom_site_U_Fourier_param.sin Also see the technical descriptions of the analogous tags.
_atom_site_moment_Fourier_param.sin_symmform
CIF
See the description and example given for the
_atom_site_moment_Fourier_param.cos_symmform item.
ATOM_SITE_MOMENT_SPECIAL_FUNC
CIF
Data items in the ATOM_SITE_MOMENT_SPECIAL_FUNC category record details about the magnetic modulation of an atom site in a modulated structure when it is not described by Fourier series. Special functions are effective in some cases where the modulations are highly anharmonic, since the number of parameters is drastically reduced. However, they are in general discontinuous or with discontinuous derivatives and therefore these functions describe an ideal situation that never occurs in a real modulated crystal. Up to now, only a few types of special functions have been used and all of them come from the JANA suite of programs. Although this approach is far from being general, it has the advantage that the functions are tightly defined and therefore the relevant parameters can be calculated easily. In this dictionary, only the special functions available in JANA2000 have been included. These are: (1) Sawtooth functions for atomic displacive modulation along x, y and z. (2) Crenel functions for the occupational modulation of atoms and rigid groups. Both of these only apply to one-dimensional modulated structures.
Analogous tags: _atom_site_displace_special_func.*, _atom_site_occ_special_func.*
_atom_site_moment_special_func.atom_site_label
CIF
This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.
_atom_site_moment_special_func.sawtooth_ax
CIF
_atom_site_moment_special_func.sawtooth_ items are the adjustable parameters of a magnetic sawtooth function. A magnetic sawtooth function is only used when working in the crystal-axis coordinate system. It is defined along the internal space direction as follows: mx=2*ax[(x4-c)/w] my=2*ay[(x4-c)/w] mz=2*az[(x4-c)/w]
with x4 belonging to the interval [c-(w/2), c+(w/2)], where
ax, ay and az are the amplitudes (maximum magnetic moments)
along each crystallographic axis, w is its width, x4 is the
internal coordinate and c is the centre of the function in
internal space. The use of this function is restricted to
one-dimensional modulated structures. For more details, see
the manual for JANA2000 (Petricek & Dusek, 2000). Calculated parameters mx, my and mz must be in Bohr-magneton units and can vary in the range (-infinity,infinity).
Ref: Petricek, V. & Dusek, M. (2000). JANA2000. The crystallographic computing system. Institute of Physics, Prague, Czech Republic.
Analogous tags: _atom_site_displace_special_func.sawtooth_*, _atom_site_occ_special_func.cresnel_*
_atom_site_moment_special_func.sawtooth_ay
CIF
_atom_site_moment_special_func.sawtooth_ items are the adjustable parameters of a magnetic sawtooth function. A magnetic sawtooth function is only used when working in the crystal-axis coordinate system. It is defined along the internal space direction as follows: mx=2*ax[(x4-c)/w] my=2*ay[(x4-c)/w] mz=2*az[(x4-c)/w]
with x4 belonging to the interval [c-(w/2), c+(w/2)], where
ax, ay and az are the amplitudes (maximum magnetic moments)
along each crystallographic axis, w is its width, x4 is the
internal coordinate and c is the centre of the function in
internal space. The use of this function is restricted to
one-dimensional modulated structures. For more details, see
the manual for JANA2000 (Petricek & Dusek, 2000). Calculated parameters mx, my and mz must be in Bohr-magneton units and can vary in the range (-infinity,infinity).
Ref: Petricek, V. & Dusek, M. (2000). JANA2000. The crystallographic computing system. Institute of Physics, Prague, Czech Republic.
Analogous tags: _atom_site_displace_special_func.sawtooth_*, _atom_site_occ_special_func.cresnel_*
_atom_site_moment_special_func.sawtooth_az
CIF
_atom_site_moment_special_func.sawtooth_ items are the adjustable parameters of a magnetic sawtooth function. A magnetic sawtooth function is only used when working in the crystal-axis coordinate system. It is defined along the internal space direction as follows: mx=2*ax[(x4-c)/w] my=2*ay[(x4-c)/w] mz=2*az[(x4-c)/w]
with x4 belonging to the interval [c-(w/2), c+(w/2)], where
ax, ay and az are the amplitudes (maximum magnetic moments)
along each crystallographic axis, w is its width, x4 is the
internal coordinate and c is the centre of the function in
internal space. The use of this function is restricted to
one-dimensional modulated structures. For more details, see
the manual for JANA2000 (Petricek & Dusek, 2000). Calculated parameters mx, my and mz must be in Bohr-magneton units and can vary in the range (-infinity,infinity).
Ref: Petricek, V. & Dusek, M. (2000). JANA2000. The crystallographic computing system. Institute of Physics, Prague, Czech Republic.
Analogous tags: _atom_site_displace_special_func.sawtooth_*, _atom_site_occ_special_func.cresnel_*
_atom_site_moment_special_func.sawtooth_c
CIF
_atom_site_moment_special_func.sawtooth_ items are the adjustable parameters of a magnetic sawtooth function. A magnetic sawtooth function is only used when working in the crystal-axis coordinate system. It is defined along the internal space direction as follows: mx=2*ax[(x4-c)/w] my=2*ay[(x4-c)/w] mz=2*az[(x4-c)/w]
with x4 belonging to the interval [c-(w/2), c+(w/2)], where
ax, ay and az are the amplitudes (maximum magnetic moments)
along each crystallographic axis, w is its width, x4 is the
internal coordinate and c is the centre of the function in
internal space. The use of this function is restricted to
one-dimensional modulated structures. For more details, see
the manual for JANA2000 (Petricek & Dusek, 2000). Calculated parameters mx, my and mz must be in Bohr-magneton units and can vary in the range (-infinity,infinity).
Ref: Petricek, V. & Dusek, M. (2000). JANA2000. The crystallographic computing system. Institute of Physics, Prague, Czech Republic.
Analogous tags: _atom_site_displace_special_func.sawtooth_*, _atom_site_occ_special_func.cresnel_*
_atom_site_moment_special_func.sawtooth_w
CIF
_atom_site_moment_special_func.sawtooth_ items are the adjustable parameters of a magnetic sawtooth function. A magnetic sawtooth function is only used when working in the crystal-axis coordinate system. It is defined along the internal space direction as follows: mx=2*ax[(x4-c)/w] my=2*ay[(x4-c)/w] mz=2*az[(x4-c)/w]
with x4 belonging to the interval [c-(w/2), c+(w/2)], where
ax, ay and az are the amplitudes (maximum magnetic moments)
along each crystallographic axis, w is its width, x4 is the
internal coordinate and c is the centre of the function in
internal space. The use of this function is restricted to
one-dimensional modulated structures. For more details, see
the manual for JANA2000 (Petricek & Dusek, 2000). Calculated parameters mx, my and mz must be in Bohr-magneton units and can vary in the range (-infinity,infinity).
Ref: Petricek, V. & Dusek, M. (2000). JANA2000. The crystallographic computing system. Institute of Physics, Prague, Czech Republic.
Analogous tags: _atom_site_displace_special_func.sawtooth_*, _atom_site_occ_special_func.cresnel_*
ATOM_SITE_ROTATION
CIF
This category provides a loop for presenting atom-site axial-vector rotations in several coordinate systems. Such axial vectors can be applied to describe the rotations of molecular or polyhedral rigid bodies about their pivot atoms or sites, though the use of this category to describe patterns of rotations does not require that rigid bodies be explicitly defined. Because magnetic moments and rotations are both axial rather than polar vectors, their descriptive requirements are highly analogous, except that static rotations are insensitive to time-reversal, so that normal (non-magnetic) symmetry groups are appropriate. This is a child category of the ATOM_SITE category, though pivot-site rotations will typically be listed in a separate loop; the category items mirror those of defined for the ATOM_SITE_MOMENT category.
_atom_site_rotation.Cartn
CIF
The atom-site rotation vector specified according to a set of orthogonal Cartesian axes where x||a and z||c* with y completing a right-hand set.
_atom_site_rotation.Cartn_x
CIF
The x component of the atom-site rotation vector
(see _atom_site_rotation.Cartn).
_atom_site_rotation.Cartn_y
CIF
The y component of the atom-site rotation vector
(see _atom_site_rotation.Cartn).
_atom_site_rotation.Cartn_z
CIF
The z component of the atom-site rotation vector
(see _atom_site_rotation.Cartn).
_atom_site_rotation.crystalaxis
CIF
The atom-site rotation vector specified using the components parallel to each of the unit-cell axes. This is the recommended coordinate system for presenting axial rotation vectors.
_atom_site_rotation.crystalaxis_x
CIF
The component of the atom-site rotation vector parallel to the first unit-cell axis. See _atom_site_rotation.crystalaxis.
_atom_site_rotation.crystalaxis_y
CIF
The component of the atom-site rotation vector parallel to the second
cell axis. See _atom_site_rotation.crystalaxis.
_atom_site_rotation.crystalaxis_z
CIF
The component of the atom-site rotation vector parallel to the third unit-cell axis. See _atom_site_rotation.crystalaxis.
_atom_site_rotation.label
CIF
This label is a unique identifier for a particular site in the asymmetric unit of the crystal unit cell.
_atom_site_rotation.modulation_flag
CIF
A code that signals whether the structural model includes the modulation of the rotation of a given atom site.
_atom_site_rotation.refinement_flags_rotational
CIF
The constraints/restraints placed on the rotation vector during model refinement.
_atom_site_rotation.spherical_azimuthal
CIF
The azimuthal angle of the atom-site rotation vector specified in spherical coordinates relative to a set of orthogonal Cartesian axes where x||a and z||c* with y completing a right-hand set. The azimuthal angle is a right-handed rotation around the +z axis starting from the +x side of the x-z plane.
_atom_site_rotation.spherical_modulus
CIF
The modulus of the atom-site rotation vector specified in spherical coordinates relative to a set of orthogonal Cartesian axes where x||a and z||c* with y completing a right-hand set.
_atom_site_rotation.spherical_polar
CIF
The polar angle of the atom-site rotation vector specified in spherical coordinates relative to a set of orthogonal Cartesian axes where x||a and z||c* with y completing a right-hand set. The polar angle is measured relative to the +z axis.
_atom_site_rotation.symmform
CIF
A symbolic expression that indicates the symmetry-restricted form of the components of the rotation vector of the atom. Unlike the positional coordinates of an atom, its rotation has no translational component to be represented.
Examples:
rx,ry,rz
rx,-rx,0
rx,0,rz
_atom_site_rotation.magnitude
CIF
The magnitude of a rotation vector.
ATOM_SITES_MOMENT_FOURIER
CIF
Data items in the ATOM_SITES_MOMENT_FOURIER category record details common to the magnetic modulations of atom sites in a modulated structure. Details for individual atom sites are described by data items in the ATOM_SITE_MOMENT_FOURIER category.
Analogous tags: _atom_sites_displace_Fourier.*, _atom_sites_rot_Fourier.*, _atom_sites_occ_Fourier.*, _atom_sites_U_Fourier.*
_atom_sites_moment_Fourier.axes_description
CIF
Describes a user-defined coordinate system for which magnetic
Fourier modulation components are to be presented. Only used
when different from those described by
_atom_site_moment_Fourier.axis.
Analogous tags: msCIF:_atom_sites_displace_Fourier.axes_description
It is not difficult to imagine an _atom_sites_rot_Fourier.axes_description tag.
Example:
a1 and a2 are respectively the long molecular axis and the axis normal to the mean molecular plane. Extracted from Baudour & Sanquer [Acta Cryst. (1983), B39, 75-84].
ATOM_TYPE_SCAT
CIF
_atom_type_scat.neutron_magnetic_j0_A1
CIF
First, the parameters are used directly to approximate spatial averages of spherical Bessel functions over the electronic wave functions of unpaired electrons of the given atom type as a function of s = sin(theta)/lambda. <jn(s)> = [A1*e^(-a2*s^2) + B1*e^(-b2*s^2) + C1*e^(-c2*s^2) + D]*[1 if n=0, s^2 if n=2,4,6] The <jn(s)> are then combined to determine the spin and orbital contributions to the magnetic form factor of the atom. The "e" parameter is a measure of error in the approximation.
Analogous tags: coreCIF:_atom_site.scat_Cromer_Mann_*
Ref: International Tables for Crystallography (2006). Vol. C, Sections 4.4.5 and 6.1.2.3 (and references therein).
_atom_type_scat.neutron_magnetic_j0_a2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j0_B1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j0_b2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j0_C1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j0_c2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j0_D
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j0_e
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j2_A1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j2_a2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j2_B1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j2_b2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j2_C1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j2_c2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j2_D
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j2_e
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j4_A1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j4_a2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j4_B1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j4_b2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j4_C1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j4_c2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j4_D
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j4_e
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j6_A1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j6_a2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j6_B1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j6_b2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j6_C1
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j6_c2
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j6_D
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_j6_e
CIF
See definition for _atom_type_scat.neutron_magnetic_j0_A1
_atom_type_scat.neutron_magnetic_source
CIF
Reference to the source of magnetic neutron scattering factors for a given atom type.
Analogous tags: coreCIF:_atom_site.scat_source
Example:
International Tables for Crystallography (2006). Vol. C, Section 4.4.5.
PARENT_PROPAGATION_VECTOR
CIF
This looped category allows for the presentation of the fundamental magnetic wave vectors in the setting of the parent structure. In general, there can be more than one fundamental magnetic wave vector. See the PARENT_SPACE_GROUP category for more information about parent space groups.
Example:
loop_ _parent_propagation_vector.id _parent_propagation_vector.kxkykz k1 [0 0 1] k2 [0 1 0] k3 [1 0 0]
_parent_propagation_vector.id
CIF
A code that uniquely identifies a fundamental magnetic propagation vector.
_parent_propagation_vector.kxkykz
CIF
A fundamental magnetic propagation vector in unitless reciprocal-lattice units of the parent space group setting.
PARENT_SPACE_GROUP
CIF
This category provides information about the space group and setting of a non-magnetic parent structure which is related to the present magnetic structure by a group-subgroup relationship. In general, the choice of a parent structure is not unique; it could be the lowest-symmetry non-magnetic structure obtained by simply setting all magnetic moments to zero, or a higher-symmetry approximation to this structure which idealizes some of the atomic coordinates. The designation of a parent structure is common but optional for a magnetic-structure description. This category could also be used to designate high-symmetry parent structures of low-symmetry non-magnetic structures. As an alternative to this category, one can define a parent structure in a separate data block, and then relate the parent and child space-group settings by conveying an appropriate inter-data-block basis transformation in each data block.
Analogous tags: none
_parent_space_group.child_transform_Pp_abc
CIF
This item specifies the transformation (P,p) of the basis vectors and origin of the present setting of the parent space group to those of the present setting of the child space group. The basis vectors (a',b',c') of the child are described as linear combinations of the basis vectors (a,b,c) of the parent, and the origin shift (ox,oy,oz) is displayed in the lattice coordinates of the parent. The Jones faithful notation and possible values are identical to those of symCIF:_space_group.transform_Pp_abc, except that the point and translational components are separated by a semicolon. If the child structure is incommensurate, the transformation applies to the present setting of the basic space group of the incommensurate structure.
Analogous tags: symCIF:_space_group.transform_Pp_abc
_parent_space_group.IT_number
CIF
Analogous tags: Perfectly analogous to symCIF:_space_group.IT_number except that it applies to the parent structure.
_parent_space_group.name_H-M_alt
CIF
Analogous tags: Perfectly analogous to symCIF:_space_group.name_H-M_alt except that it applies to the parent structure.
_parent_space_group.reference_setting
CIF
Analogous tags: Perfectly analogous to symCIF:_space_group.reference_setting except that it applies to the parent structure.
_parent_space_group.transform_Pp_abc
CIF
Analogous tags: Notation and usage is analogous to symCIF:_space_group.transform_Pp_abc except that it applies to the parent structure, and that the point and translational components are separated by a semicolon.
SPACE_GROUP_MAGN
CIF
The data items in this category provide identifying and/or descriptive information about the relevant magnetic symmetry group and setting.
_space_group_magn.name_BNS
CIF
See _space_group_magn_number_OG for a description of magnetic space groups (MSGs). The Belov-Neronova-Smirnova (BNS) symbol for a MSG is based on the short Hermann-Mauguin space-group symbol of non-magnetic space group F for MSGs of types 1-3 or its subgroup D for MSGs of type 4. For a type-1 MSG, the symbol for the MSG is identical with the unprimed symbol of F. For a type-2 MSG, its symbol is the symbol of the space group F followed by 1'. For a type-3 MSG, one starts with the symbol for F and then primes any non-translational generators whose corresponding MSG elements are time reversed. For a type-4 MSG, the non-translational generators are never primed. A subscript always appears on the first (lattice) character of the symbol of a type-4 MSG, and communicates that a pure time-reversal element is included in the point group of the MSG. The value of this subscript indicates the magnetic lattice of the MSG, and specifically indicates the translational part of the generator whose point part is the pure time reversal. Note that OG and BNS symbols are identical for MSGs of types 1-3, but differ substantially for MSGs of type 4.
Analogous tags: symCIF:_space_group.name_H-M_ref
Ref: 'Magnetic Group Tables' by D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0. ISO-MAG tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu.
Examples:
P 1
P 1 1'
P_S 1
P -1
P -1 1'
P -1'
P_2s -1
I a' -3 d'
_space_group_magn.name_OG
CIF
See _space_group_magn.number_OG for more information on magnetic space groups (MSGs). The Opechowski-Guccione (OG) symbol for an MSG is based on the short Hermann-Mauguin space-group symbol of non-magnetic space group F. For a type-1 MSG, the OG symbol for the MSG is identical with the unprimed symbol of F. For a type-2 MSG, the OG symbol is the symbol of the non-magnetic space group F followed by 1'. For a type-3 or type-4 MSG, the OG symbol is constructed by starting with the symbol for F and then priming the symbols of any non-translational generators whose corresponding MSG elements are time reversed. When a non-translational generator symbol could potentially represent both time-reversed and non-time-reversed symmetry elements, the prime placement is as described in the Magnetic Group Tables of Litvin. A subscript always appears on the first (lattice) character of the symbol of a type-4 MSG, and communicates that a pure time-reversal element is included in the point group of the MSG. The value of this subscript indicates the magnetic lattice of the MSG. Note that OG and BNS symbols are identical for MSGs of types 1-3, but differ substantially for MSGs of type 4.
Analogous tags: symCIF:_space_group.name_H-M_ref
Ref: 'Magnetic Group Tables' by D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0. ISO-MAG tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu.
Examples:
P 1
P 1 1'
P_S 1
P -1
P -1 1'
P -1'
P_2s -1
I a' -3' d'
_space_group_magn.number_BNS
CIF
See _space_group_magn.number_OG for a description of magnetic space groups (MSGs). The Belov-Neronova-Smirnova (BNS) number for an MSG is composed of two positive integers separated by a period. The first integer lies in the range [1-230] and indicates the non-magnetic space group F for MSGs of types 1-3 or the non-magnetic space group of the subgroup D for MSGs of type 4. The second integer is sequential over all MSGs associated with the same crystal family. There are 1651 distinct equivalence classes of MSGs, each of which has a unique BNS number. These equivalence classes are most accurately referred to as magnetic space-group "types", following the usage in the International Tables for Crystallography. But the word "type" is also commonly used to indicate the four-fold classification of MSGs presented above. To avoid confusion, the word "type" is only used in the latter sense here.
Analogous tags: symCIF:_space_group.number_IT
Ref: 'Magnetic Group Tables' by D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0. ISO-MAG tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu.
Examples:
1.1
1.2
1.3
2.4
2.5
2.6
2.7
230.149
_space_group_magn.OG_wavevector_kxkykz
CIF
The magnetic propagation vector (k) of the OG(k)-supercell description, which determines the time-reversal component of each translation vector (x) of the OG lattice (including the centering vectors if a centered setting is used) according to the expression cos(2*pi*k.x) = +/-1, where x is defined in the unitless coordinates of the direct-space OG lattice and k is defined in the unitless coordinates of the corresponding reciprocal-space lattice. If 2*k.x has a non-integer value for any OG lattice (or centering) translation, the definition of k is incorrect. The value of OG wave vector is essential to the OG(k) description of the magnetic space group symmetry; it cannot be omitted from such a description without ambiguity.
_space_group_magn.point_group_name
CIF
Any magnetic point group (MPG) can be constructed by starting with a non-magnetic point group P, and then by adding a time-reversal component to some or all or none of its elements. For a type-1 MPG, M = P, there are no time-reversed elements. For a type-2 MPG, M = P + P1', there is both a time-reversed and a non-time-reversed copy of each element in P. For a type-3 MPG, M = Q + (P - Q)1', there is a subgroup Q of P of index 2 whose elements are not time reversed, whereas the remaining elements in P-Q are time reversed. For a type-1 MPG, the symbol is identical with the symbol for the non-magnetic point group P. For a type-2 MPG, the symbol is the symbol for P followed by the symbol 1'. For a type-3 MPG, the symbol is that of P with a prime added to each time-reversed generator.
Analogous tags: symCIF:_space_group.point_group_H-M
Ref: 'Magnetic Group Tables' by D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0
Examples:
1
1 1'
-1
-1 1'
-1'
4 m m
4' m' m
4' m m'
_space_group_magn.point_group_number
CIF
Each of the 122 crystallographic magnetic point groups can be associated with exactly one crystallographic non-magnetic space group by removing the time-reversal component from each group operator. The identifying number for each such group is taken from the "Survey of 3-dimensional magnetic point group types" from the "Magnetic Group Tables" of D.B. Litvin. This number is composed of three integers: (1) an integer from 1 to 32 that corresponds to the non-magnetic point group; (2) an integer that runs sequentially over each of the magnetic point groups associated with a given non-magnetic point group; and (3) a redundant third integer that runs from 1 to 122.
Ref: 'Magnetic Group Tables' by D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0
Examples:
1.1.1
32.5.122
_space_group_magn.ssg_name
CIF
The Belov-Neronova-Smirnova (BNS) symbol for a magnetic superspace group (MSSG) is based on the symbol of the non-magnetic superspace group (SSG) obtained by eliminating all time-reversed operators from the group, as listed in the ISO(3+d)D tables of Stokes and Campbell. If the magnetic basic space group (MBSG) is of type-1 or type-3 (also known as type-3a), its BNS symbol merely replaces that of the basic space-group (BSG). If the MBSG is of type-2 or type-4 (also known as type-3b), an additional phase-shift symbol associated with the time-reversal generator is added to each modulation vector. If the MBSG is of type-4, the BNS symbol of the MSSG is further modified to explicitly show the time-reversal generator (1') at the end, and the anti-centering subscript is moved from the lattice symbol to the 1' so as to clearly indicate the fractional external-space translation of this generator. The examples are based on SSG 47.1.9.3 Pmmm(0,0,g)ss0 in (3+1)D.
Analogous tags: msCIF:_space_group.ssg_name
Ref: ISO-MAG tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu. ISO(3+d)D tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu.
Examples:
Pmmm(0,0,g)ss0
Pmmm1'(0,0,g)ss00
Pmmm1'(0,0,g)ss0s
Pm'm'm(0,0,g)ss0
Pmmm1'_a(0,0,g)ss00
Pmmm1'_a(0,0,g)ss0s
_space_group_magn.ssg_number
CIF
The Belov-Neronova-Smirnova (BNS) number for a magnetic superspace group. This tag is being held in reserve until a future numbering scheme is approved.
Analogous tags: msCIF:_space_group.ssg_number
_space_group_magn.transform_BNS_Pp
CIF
This item specifies the transformation matrix Pp of the basis vectors and origin of the current setting to those of the Belov-Neronova-Smirnova setting presented in the ISO-MAG tables. The basis vectors (a',b',c') of the BNS setting are obtained as
(a',b',c',1) = Pp (a,b,c,1)
where (a,b,c) are the current basis vectors.
Ref: ISO-MAG tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu
Wondratschek, H., Aroyo, M. I., Souvignier, B. and Chapuis, G. Transformation of coordinate systems. In International Tables for Crystallography (2016). Volume A, Space-group symmetry, edited by M. Aroyo, 6th ed. ch 1.5. Chichester: Wiley.
Examples:
[[1 0 0 0.25] [0 1 0 0 ] [0 0 1 0 ] [0 0 0 1 ]]
[[0 0 1 0 ] [0 -1 0 0.25] [1 0 0 0 ] [0 0 0 1 ]]
_space_group_magn.transform_BNS_Pp_abc
CIF
This item specifies the transformation (P,p) of the basis vectors and origin of the current setting to those of the Belov-Neronova-Smirnova setting presented in the ISO-MAG tables. The basis vectors (a',b',c') of the BNS setting are described as linear combinations of the current basis vectors (a,b,c), and the origin shift (ox,oy,oz) is displayed in the lattice coordinates of the current setting. The Jones faithful notation and possible values are identical to those of symCIF:_space_group.transform_Pp_abc, except that the point and translational components are separated by a semicolon.
Analogous tags: symCIF:_space_group.transform_Pp_abc
Ref: ISO-MAG tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu
_space_group_magn.transform_OG_Pp
CIF
This item specifies the transformation (P,p) of the basis vectors and origin of the current setting to those of the Opechowski-Guccione setting presented in the Magnetic Group Tables of D.B. Litvin. The basis vectors (a',b',c') of the OG setting are obtained as
(a',b',c',1) = Pp (a,b,c,1)
where (a,b,c) are the current basis vectors.
Ref: 'Magnetic Group Tables' by D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0
Wondratschek, H., Aroyo, M. I., Souvignier, B. and Chapuis, G. Transformation of coordinate systems. In International Tables for Crystallography (2016). Volume A, Space-group symmetry, edited by M. Aroyo, 6th ed. ch 1.5. Chichester: Wiley.
_space_group_magn.transform_OG_Pp_abc
CIF
This item specifies the transformation (P,p) of the basis vectors and origin of the current setting to those of the Opechowski-Guccione setting presented in the Magnetic Group Tables of D.B. Litvin. The basis vectors (a',b',c') of the reference setting are described as linear combinations of the current basis vectors (a,b,c), and the origin shift (ox,oy,oz) is displayed in the lattice coordinates of the current setting. The Jones faithful notation and possible values are identical to those of symCIF:_space_group.transform_Pp_abc, except that the point and translational components are separated by a semicolon.
Analogous tags: symCIF:_space_group.transform_Pp_abc
Ref: 'Magnetic Group Tables' by D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0
SPACE_GROUP_MAGN_SSG_TRANSFORMS
CIF
This loop provides a list of matrix transformations to one or more settings of the magnetic superspace group, including transformations to both standard and non-standard settings. A transformation loop is particularly helpful for magnetic superspace groups, which often have several reference settings of interest.
Analogous tags: transform loops have not yet been approved in other dictionaries.
_space_group_magn_ssg_transforms.description
CIF
A string that describes the source of a reference setting for the
magnetic superspace group. The item
_space_group_magn_ssg_transforms.source should be used if the
reference source is one of those provided in that
definition. Otherwise, arbitrary free text can be used to describe
reference settings of interest, such as might appear in a specific
publication, though care should be taken to make the description
clear and unambiguous.
_space_group_magn_ssg_transforms.id
CIF
An arbitrary identifier that uniquely labels each setting transformation of interest in a looped list of superspace-group transformations. Most commonly, a sequence of positive integers is used for this identification.
Analogous tags: transform loops have not yet been approved in other dictionaries.
_space_group_magn_ssg_transforms.Pp_superspace
CIF
This item specifies the transformation (P,p) of the superspace
basis vectors from the current setting (a1,...,a(3+d)) to a
reference setting (a1',...,a(3+d)') given by
_space_group_magn_ssg_transforms.description. The origin shift
is presented in the unitless lattice coordinates of the current
setting.
The notation and usage are analogous to those of
_space_group.transform_Pp_abc, except that P now represents a
superspace point operation, that p now represents a superspace
translation, and that the point and translational components
are now separated with a semicolon.
Analogous tags: symCIF:_space_group.transform_Pp_abc
Examples:
a1,a2,a3,a4,a5;0,0,0,0,0
-a2,a1,1/2a3,-a1+a5,-1/2a3+a4;1/4,-1/4,0,1/4,0
_space_group_magn_ssg_transforms.source
CIF
A string that describes the source of a reference setting for the
magnetic superspace group.
If the reference source does not appear in the list below, use
_space_group_magn_ssg_transforms.description
Ref: 'Magnetic Group Tables' of D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0. ISO-MAG tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu. ISO(3+d)D tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu.
SPACE_GROUP_MAGN_TRANSFORMS
CIF
This category provides a list of matrix transformations to multiple settings of the magnetic space group, including transformations to both standard and non-standard settings. A transformation loop is particularly helpful for a magnetic space group, which often have several reference settings of interest.
Example:
loop_ _space_group_magn_transforms.id _space_group_magn_transforms.Pp_abc _space_group_magn_transforms.description _space_group_magn_transforms.source 1 'a,b,c;0,0,0' . "data_block_CURRENT" 2 'a/2,b,c;0,0,0' "data_block_205763" . 3 'a,b,c;0,0,0' . "BNS" 4 'a/2,b,c;0,0,0' . "OG" 5 'a/4,b,c;0,0,0' "literature citation to a nuclear parent structure" .
_space_group_magn_transforms.description
CIF
A string that describes the source of the magnetic-space-group reference setting indicated by the _space_group_magn_transforms.Pp_abc tag. _space_group_magn_transforms.source should be used if the reference source is one of those provided in that definition. The value string "data_block_<blockname>" refers to the setting used in a separate data block named "blockname" within the same file. Otherwise, arbitrary free text can be used to describe other reference settings of interest, such as might appear in a specific publication, though care should be taken to make the description clear and unambiguous.
_space_group_magn_transforms.id
CIF
An arbitrary identifier that uniquely labels each setting transformation of interest in a looped list of space-group transformations.
Analogous tags: transform loops have not been approved in other dictionaries.
_space_group_magn_transforms.Pp
CIF
This item specifies the transformation (P,p) of the basis vectors and origin in the current setting of the CIF file to the reference setting described by the _space_group_magn_transforms.description or _space_group_magn_transforms.source tags, and should not be used without this description. The basis vectors (a',b',c') of the reference setting are obtained as
(a',b',c',1) = Pp (a,b,c,1)
where (a,b,c) are the current basis vectors.
Ref: Wondratschek, H., Maroto, M. I., Souvignier, B. and Chapuis, G. Transformation of coordinate systems. In International Tables for Crystallography (2016). Volume A, Space-group symmetry, edited by M. Aroyo, 6th ed. ch 1.5. Chichester: Wiley.
_space_group_magn_transforms.Pp_abc
CIF
This item specifies the transformation (P,p) of the basis vectors and origin in the current setting of the CIF file to the reference setting described by the _space_group_magn_transforms.description or _space_group_magn_transforms.source tags, and should not be used without this description. The basis vectors (a',b',c') of the reference setting are described as linear combinations of the current basis vectors (a,b,c), and the origin shift (ox,oy,oz) is displayed in the lattice coordinates of the current setting. The Jones faithful notation and possible values are identical to those of symCIF:_space_group_transform_Pp_abc, except that the point and translational components are separated by a semicolon.
Analogous tags: symCIF:_space_group.transform_Pp_abc
_space_group_magn_transforms.source
CIF
A string that describes the source of the magnetic space group
reference indicated by the _space_group_magnetic_transforms.Pp_abc
tag. If the reference source does not appear in the list below, use
_space_group_magn_transforms.description
Ref: 'Magnetic Group Tables' of D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0. ISO-MAG tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu. ISO(3+d)D tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu.
SPACE_GROUP_SYMOP_MAGN_OG_CENTERING
CIF
This loop provides a list of centering translations in an
OG(k)-supercell description of a magnetic space group.
For an OG(k)-supercell description, this loop is mandatory and
entirely distinct from the optional
SPACE_GROUP_SYMOP_MAGN_CENTERING loop used to simplify the
presentation of a BNS-supercell description.
An integer translation in an OG setting of a type-4 magnetic
space group may have a time-reversal component of -1, in which
case it is actually an anti-translation vector rather than a lattice
vector. This loop should include all centering and anti-centering
translations, but does not include the time-reversal components,
which are instead determined
using the value of the _space_group_magn.OG_wavevector_kxkykz tag.
Because the centering translations are listed in a separate loop
in the OG(k) description,
only representative point operations remain in the main
SPACE_GROUP_SYMOP_MAGN_OPERATION loop.
_space_group_symop_magn_OG_centering.description
CIF
An optional free-text description of a particular centering operation from the OG(k)-supercell description of a magnetic space group, without the time-reversal component.
Analogous tags: centering loops have not been approved for other dictionaries.
Example:
(1/2,1/2,0)
_space_group_symop_magn_OG_centering.id
CIF
An arbitrary loop identifier that uniquely labels each centering translation in an OG(k)-supercell description of a magnetic space group. Most commonly, a sequence of positive integers is used for this identification.
Analogous tags: centering loops have not been approved for other dictionaries.
_space_group_symop_magn_OG_centering.xyz
CIF
A parsable string giving one of the centering operations of the
OG(k)-supercell description of a magnetic space group in
algebraic form. The form of such a string is identical to that
expected for _space_group_symop_operation.xyz, except that the
rotational part of a translation must always be the identity
element. The magnetic component of the centering vector is not
given in the value of this tag, but should instead be separately
established using the value of the
_space_group_magn.OG_wavevector_kxkykz tag.
Example:
x+1/2,y+1/2,z
SPACE_GROUP_SYMOP_MAGN_CENTERING
CIF
This loop provides a list of centering or anti-centering translation in a BNS-supercell description of a magnetic space group. Keeping the centering and anti-centering translations in a separate loop leaves only representative point operations in the main SPACE_GROUP_SYMOP_MAGN_OPERATION loop. The direct sum of the two loops produces the full set of representative operations of the magnetic space group. This centering loop is optional, so that it is always possible to include all of the symmetry operations in the main loop. When this centering loop is employed, the representative point operations in the main SPACE_GROUP_SYMOP_MAGN_OPERATION loop may not form a closed subgroup, but instead generate some of the fractional translations of the centering loop. Despite this annoyance, a separate centering loop is important because magnetic structures tend to have a relatively large number of centering and anti-centering translations, which can make the resulting list of operators very long and unintuitive, especially when working in non-standard settings. One could argue that anti-centering operations belong in the main representative- point-operation loop since they are not actually translations of the magnetic lattice. In fact, a pure time reversal is a generator of the magnetic point group of a type-4 magnetic space group. Nevertheless, this centering loop is defined to include the anti-centerings due to the common practice of referring to a "black and white" lattice of centerings and anti-centerings.
Example:
loop_ _space_group_symop_magn_centering.id _space_group_symop_magn_centering.xyz _space_group_symop_magn_centering.description 1 'x+1/2,y+1/2,z,+1' 'a non-time-reversed (1/2,1/2,0) translation' 2 'x+1/2,y+1/2,z,-1' 'a time-reversed (1/2,1/2,0) translation'
_space_group_symop_magn_centering.description
CIF
An optional free text description of a particular centering or anti-centering translation in the BNS-supercell description of a magnetic space group.
Example:
"(1|1/2,1/2,0)'", "(1'|1/2,1/2,0)" or "(1/2,1/2,0) anti-centering translation" would adequately describe "x+1/2,y+1/2,z,-1"
_space_group_symop_magn_centering.id
CIF
An arbitrary identifier that uniquely labels each centering or anti-centering translation in a BNS-supercell description of a magnetic space group. Most commonly, a sequence of positive integers is used for this identification.
_space_group_symop_magn_centering.xyz
CIF
A parsable string giving one of the centering or anti-centering
translations in the BNS-supercell description of a magnetic space
group in algebraic form. The form of such a string is identical
to that expected for _space_group_symop_magn_operation.xyz,
except that the rotational part of a translation must always be
the identity element.
SPACE_GROUP_SYMOP_MAGN_OPERATION
CIF
A list of magnetic space-group symmetry operations.
_space_group_symop_magn_operation.description
CIF
The description of a particular symmetry operation of the magnetic space group, which can be presented in either the geometric notation presented in the International Tables for Crystallography (2006), Volume A, section 11.1.2, or the Seitz notation as presented in Acta Cryst. (2014), A70, 300-302. This tag is intended for use with the BNS-supercell description of a magnetic structure.
Analogous tags: symCIF:_space_group_symop.operation_description
Ref: 'Magnetic Group Tables' by D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0. ISO-MAG tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu.
_space_group_symop_magn_operation.id
CIF
An arbitrary identifier that uniquely labels each symmetry operation in a looped list of magnetic space-group symmetry operations. Most commonly, a sequence of positive integers is used for this identification. The _space_group_symop_magn.id alias provides backwards compatibility with the established magCIF prototype.
_space_group_symop_magn_operation.xyz
CIF
A parsable string giving one of the symmetry operations of the magnetic space group in algebraic form. The analogy between parsable labels for magnetic and non-magnetic symmetry operations is perfect except for the fact that a magnetic symop label ends with an additional piece of information ("-1" or "+1") indicating that the operation is or is not time-reversed, respectively. This tag is intended for use with the BNS-supercell description of a magnetic structure.
Analogous tags: symCIF:_space_group_symop.operation_xyz
Ref: 'Magnetic Group Tables' by D.B. Litvin at http://www.iucr.org/publ/978-0-9553602-2-0. ISO-MAG tables of H.T. Stokes and B.J. Campbell at http://iso.byu.edu.
Examples:
x+1/2,y+1/2,z,-1
-y,x,z+1/2,-1
-y,x,z+1/2,+1
SPACE_GROUP_SYMOP_MAGN_SSG_CENTERING
CIF
This loop provides a list of the centering and anti-centering translations of a magnetic superspace-group.
_space_group_symop_magn_ssg_centering.algebraic
CIF
A parsable string giving one of the centering or anti-centering operations of the magnetic superspace group in algebraic form. The form of such a string is identical to that expected for _space_group_symop_magn_ssg_operation.algebraic, except that the rotational part of a translation must always be the identity element. See the description of _space_group_symop_magn_centering.id for more information about centering loops. This tag is intended for use with the BNS description of the magnetic basic cell.
Examples:
x1,x2,x3,x4,x5,+1
x1,x2,x3,x4+1/2,-1
x1+1/2,x2+1/2,x3+1/2,x4,+1
x1+1/2,x2,x3,x4,x5,x6+3/2,-1
_space_group_symop_magn_ssg_centering.id
CIF
An arbitrary identifier that uniquely labels each centering or
anti-centering translations in a looped list of magnetic
superspace-group symmetry operations. Most commonly, a sequence
of positive integers is used for this identification. This tag
is intended for use with the BNS description of the magnetic
basic cell.
Analogous to the case of magnetic space groups, the magCIF
dictionary allows the subgroup of time-reversed and
non-time-reversed fractional translations of a magnetic superspace group
to be split off into a separate loop. See the description of
_space_group_symop_magn_centering.id for more information about
centering loops.
SPACE_GROUP_SYMOP_MAGN_SSG_OPERATION
CIF
A looped list of magnetic superspace-group symmetry operations.
Analogous tags: msCIF:_space_group_symop.ssg_*
_space_group_symop_magn_ssg_operation.algebraic
CIF
A parsable string giving one of the symmetry operations of the magnetic superspace group in algebraic form. The analogy between parsable labels for magnetic and non-magnetic symmetry operations is perfect except for the fact that a magnetic symop label ends with an additional piece of information ("-1" or "+1") indicating that the operation is or is not time-reversed, respectively. This tag is intended for use with the BNS description of the magnetic basic cell.
Analogous tags: msCIF:_space_group_symop.ssg_operation_algebraic
Examples:
x1,x2,x3,x4,x5,x6,+1
x1,x2,x3,x4+1/2,-1
x1+1/2,x2+1/2,-x3,-x4,-1
x1-x2,x1,x3+1/3,x4-1/6,x5,+1
_space_group_symop_magn_ssg_operation.id
CIF
An arbitrary identifier that uniquely labels each symmetry operation in a looped list of magnetic superspace-group symmetry operations. Most commonly, a sequence of positive integers is used for this identification. The _space_group_symop_magn_ssg.id alias provides backwards compatibility with the established magCIF prototype.
Analogous tags: msCIF:_space_group_symop_ssg_id
Revision history
Version 0.1 (2016-05-24) Initial automatic conversion from draft magCIF format (James Hester)
Version 0.9 (2016-05-27) Manual editing of examples and definition text to remove
conversion artefacts.
Reparenting of categories that are children of cif_core categories.
Version 0.9.1 (2016-05-30) Added import of cif_core dictionary. Added category keys and linked items.
Version 0.9.2 (2016-06-10) Added missing transformation and parent space group items. Enhanced type
information
Version 0.9.3 (2016-06-23) Finalised outstanding issues from conversion.
Version 0.9.4 (2016-06-28) Added underscore aliases for datanames already in common use
Version 0.9.5 (2016-07-05) Added _space_group.magn_point_group_number;
changed _space_group.magn_point_group
to _space_group.magn_point_group_name
Version 0.9.6 (2016-10-10) Moved _space_group.magn_ items to new category _space_group_magn
Version 0.9.7 (2016-12-16) Editorial/consistency changes (B. McMahon)
Version 0.9.8 (2018-08-24) Added _atom_site_moment.magnitude, improved descriptions of _atom_site_moment .cartesion* items, corrected and improved *_symmform descriptions. Created the atom_site_rotation category. (B Campbell)
Version 0.9.9 (2023-01-17) Changed several instances of "Jones-Faithful notation" to
"Jones faithful notation".